Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3412 |
Symbol | yaeT |
ID | 4186285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3889652 |
End bp | 3892198 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073402 |
Product | outer membrane protein; surface antigen |
Protein accession | YP_679991 |
Protein GI | 110639781 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TTCTATACCT CATTTTTTTA TTACTCGTAA TAACTTTTAC AGCAAATAGC CAGTGGAGAT ATGGTGCTAA AAGAAACAAC GTAGATATAA ATTACGAGAC CCCGCAAGAC TTTTATATCG GAGGAATTTC AGTCTCCGGT GTTCAGTTTT TAGATCCTGA AGCAATTATT GCATTGACTG GTTTAAAAAT CGGCGATAAG GTTACTATTC CCGGAGATGA AATTACAAAT GCCATTAAAA AGCTGTGGGA ACAAGGGCTG ATCGGCGATG TAGAAGTTGT AGTAAAAAAA ATTGAGGTTA AAAATATTTA CCTTGAATTC ATTATCAAAG AACGTCCCAG ACTTACAAAG TTTATTTTTG ACGGACCAAC AAAATCAGAA CGTGAAGATT TAGAAGACAA AATTGATTTG TCAAGAGGTA GAATTGTAAA TGATGCCTTA ATAAAGAATG CAAAAAATAA AATCCGTGAA TTCTATTTAG AAAAAGGATA CCTGAATGTA GCTGTTGATA TCATACAGAC AAAGGATACC ATTTTAGAGA ACAACGTTAT TTTACGGGTT GTTGTTGACA AAAAACATAA GGTCAGGATC AAAAAAGTAA TCATTACCGG TAATGAGTCG TTTGAGTCTG CAACTCTTCA ATCCAAAATG AAGAAAACCA AAGGACAGAA ATTAACCAAT GTCTGGACGG GATCAAAAGT CATAAATAAA AACTATGTAG CTGACAAAGC AGCATTGATT GAATACTACA ACTCTAAAGG TTATCGCGAT GCACGCATTG TCAGTGATTC TATAATCCCT GTAAAAAACG ATCACGTAAA TATTACCATT CAGCTTGAAG AAGGTAATAA GTATTATTTC CGCAACATTA CCTGGAAAGG GAATTATATT TATAGTACCG CACAGCTTCA GGAAATTTTA GCGATTAAAA AAGGTGATGT ATACAACAAT GATCTGTTAC AGCGCAAGCT TAGCTTCAAT CCTGCCGGGC CAGACATCAG TTCGCTTTAT TTAGATAATG GATATTTATT CTTTAGCATA GACCCGGTTG AAATTTTAAT TGAAGGCGAC TCTATTGATA TCGAAATGCG TATCTACGAA GGTGAGCAGG CAATCGTGAA TCATATAGAA GTGGATGGTA ATACAAAAAC ACACGATCAT GTGATTCTTC GTGAAGTGAG AACGTACCCG GGTGATAAAT TCAGCCGTGC CGATCTGATC CGTACACAAA GAGAATTGGG GGCATTAAAT TATTTCGATA ATGAGAAATT AGGTATGAAC CCTGTTCCAA ATCAGGCTAC AGGTAAAGTT GATATTGGTT ATACTGTAGT TGAAAAACCA AATGACCAGG TAGAATTATC CGGTGGTTGG GGTGGTTATT ATGGATTTGT AGGAACGGTT GGTTTGGTAT TCAACAATTT CTCTCTTAGA AATATCAAAC ATCCTAAGAC CTGGAGCCCG CTACCTGCCG GTGATGGACA AAGACTTGCC TTTAGAGTGC AAGCCAATGG AAGAACATAC CAGACCTATA CAATTTCATT TACAGAACCT TGGTTAGGAG GTAAAAAACC AACGTCCTTA TCTGTAAGTT TACAGCACTC TGTGCAGAGC CAGCTTATTT ATAATGGTAC AAGAAGTGTT AAATCAGGTT CTTTACAGGT AAGCGGATTA ACGGTGAGTG TAGGTAAACG TTTGAAATGG CCGGATGATT TCTTTACAAT CAACCATACG TTCTCTTTAT TACGCTACAC GCTTAATAAT TATCAAAGCA GTTCTTCTAC AGCAGTGATC GGTTATACAA CTGGTTATTC CAATAACTTA TCTTATAACT TAACGGTTTC AAGAAATAGC ATTGATAATT TCCAGTTCCC GTCATCGGGT GCAAACATGG CATTCAGCAT GACTTTCACG CCTCCGTATT CTTATTTCAA CAAACTGAAT TATGATGATC CGGACTTAGA AGCGTCTCAA CGTTATAAGT GGTTAGAATA TCAAAAATAT GGTTTTGATG CTTCGTGGTT TACTACGTTA TGGCAGCATA GAAAGAAATC AAAACATAAA ATTGTATTCA ACGCACGTTT CCATGGTGGT GTTATCGCAG CGTACCAGCC TGGCGTTGGT GTAGGTCCGT TCGAACGTTA TATCATGGGT GGTGATGGTC TTTCCGGATA CAACTTCTTA TTGGGTTCAG ACATCATTGG TTTAAGAGGT TATGGAAACA ATACCATCAA GCCTACGCAA TCAGGTGGTG TTGCTTTTGA TAAATTTGTT GCTGAAGTGC GTTATCCGAT CTCTAACAGT CCGTCTTTCT CTATTTTCGT ATTAACCTTC TTTGAAGCAG GTAATGCATG GGGCGATATT CATGATGTAA ATCCATTTAA TGTATATCGT TCTGCAGGTG TGGGTGCTAG AATATTTATG CCGGCATTTG GTTTGATAGG TATTGACTGG GGTGTACCAT TTGATCAGGT TCCTGGTTAT CCAAATCCTA CCTACAAACC GCACGTTACG TTCACAATTG GTCAACAAAT CCGTTAG
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Protein sequence | MKKILYLIFL LLVITFTANS QWRYGAKRNN VDINYETPQD FYIGGISVSG VQFLDPEAII ALTGLKIGDK VTIPGDEITN AIKKLWEQGL IGDVEVVVKK IEVKNIYLEF IIKERPRLTK FIFDGPTKSE REDLEDKIDL SRGRIVNDAL IKNAKNKIRE FYLEKGYLNV AVDIIQTKDT ILENNVILRV VVDKKHKVRI KKVIITGNES FESATLQSKM KKTKGQKLTN VWTGSKVINK NYVADKAALI EYYNSKGYRD ARIVSDSIIP VKNDHVNITI QLEEGNKYYF RNITWKGNYI YSTAQLQEIL AIKKGDVYNN DLLQRKLSFN PAGPDISSLY LDNGYLFFSI DPVEILIEGD SIDIEMRIYE GEQAIVNHIE VDGNTKTHDH VILREVRTYP GDKFSRADLI RTQRELGALN YFDNEKLGMN PVPNQATGKV DIGYTVVEKP NDQVELSGGW GGYYGFVGTV GLVFNNFSLR NIKHPKTWSP LPAGDGQRLA FRVQANGRTY QTYTISFTEP WLGGKKPTSL SVSLQHSVQS QLIYNGTRSV KSGSLQVSGL TVSVGKRLKW PDDFFTINHT FSLLRYTLNN YQSSSSTAVI GYTTGYSNNL SYNLTVSRNS IDNFQFPSSG ANMAFSMTFT PPYSYFNKLN YDDPDLEASQ RYKWLEYQKY GFDASWFTTL WQHRKKSKHK IVFNARFHGG VIAAYQPGVG VGPFERYIMG GDGLSGYNFL LGSDIIGLRG YGNNTIKPTQ SGGVAFDKFV AEVRYPISNS PSFSIFVLTF FEAGNAWGDI HDVNPFNVYR SAGVGARIFM PAFGLIGIDW GVPFDQVPGY PNPTYKPHVT FTIGQQIR
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