Gene CHU_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3405 
Symbol 
ID4186520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3884133 
End bp3884651 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content34% 
IMG OID638073395 
Producthypothetical protein 
Protein accessionYP_679984 
Protein GI110639774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.430774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAATAA TTGATATTAT CTTAATTCTG ATTTTGGGCT ATGGGGGCTA CAAAGGTTAT 
CAGACAGGTT TATTAATTCA GATTATTACA TTTGTTGCTT TTGTTATTGC CATAATCGCT
GCGTTTAATT TATGCCAGCA AGGCATCCTG AAACTGAAAG AGTGGTTTGA TTTAGAAGAA
AGTATATTAC CGGTTGTAAG CTTTATCGCC ATCTTTCTTG TTGTACTTAT TTTAATTATT
CTTCTTGGAA AATTCCTAAC AACAGTGTTA CATCAAACTC TGTTTGGAAG CCTGGACCAA
TATGCCGGTG CATTGGTCGG AATTCTGAAA GCAGCATTCG GGCTTGGCTG TTTGTTGTGG
CTGCTTGATA AATCCGGATT AAAAATTCCT GCAGAATACA TTGATGAATC ATTTGTATAT
ACTTGGCTCA CAGAATATTC GCCAAGTGTT ATAAAACTTT TAGGTAAAAT AATTCCGTTG
CAGGATATTA TGGAAAAAGT AAAAGAATTA ATTGATTAA
 
Protein sequence
MEIIDIILIL ILGYGGYKGY QTGLLIQIIT FVAFVIAIIA AFNLCQQGIL KLKEWFDLEE 
SILPVVSFIA IFLVVLILII LLGKFLTTVL HQTLFGSLDQ YAGALVGILK AAFGLGCLLW
LLDKSGLKIP AEYIDESFVY TWLTEYSPSV IKLLGKIIPL QDIMEKVKEL ID