Gene CHU_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3404 
Symbol 
ID4186519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3883664 
End bp3884125 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content38% 
IMG OID638073394 
Producthypothetical protein 
Protein accessionYP_679983 
Protein GI110639773 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.432721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAA AAGCAACAAT TGAATCAGAA ATTAAAAAAG CCATGCTTGC ACGTAATGCA 
GATGATTTAA GAGGATTAAG AGCTCTCAAG TCGATGATAT TATTGGCTGA AACCGAAAAA
GGTGCTACAG GCGGGGATTT AACTACTGAA CAGGAATCTA AAATATTAAC GAAAGCATAT
AAACAGCGGA AAGAATCTGC TGAAATTTTC GCTCAACAAG GTAGAAAAGA CTTAGAGGAA
AAAGAATTAC AGGAAATTGC TGTTATCGAA CGTTTCCTTC CCAAACAATT ATCTGCAGAA
GAAGTTGAAT CGGTTGTAAA AGAAATTGCT GCTAAAGTTG GTGCCAAAGG CCCTGCAGAC
ATGGGTAAAG TGATGGGTGT TGCGTCAAAA GAATTAGCCG GTAAAGCAGA AGGTAAGGCT
GTTTCAGAAG CAGTAAAAAA AGTATTGGCA ACATTAGCAT AA
 
Protein sequence
MSLKATIESE IKKAMLARNA DDLRGLRALK SMILLAETEK GATGGDLTTE QESKILTKAY 
KQRKESAEIF AQQGRKDLEE KELQEIAVIE RFLPKQLSAE EVESVVKEIA AKVGAKGPAD
MGKVMGVASK ELAGKAEGKA VSEAVKKVLA TLA