Gene CHU_3385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3385 
Symbol 
ID4187174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3866391 
End bp3867326 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content41% 
IMG OID638073375 
Producthypothetical protein 
Protein accessionYP_679964 
Protein GI110639754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.228236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0593446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTAT CTGTTTTAAA ACACGTTCAT TTAACAAGTA TCCCTTCAGC TTCAGCGGTT 
GAAGTAGTAA ACGGCAACAT TTACATCGTT GGCGACGACT CAAGCTTCCT GTATGTGCTT
AAATACGATT TAACCGTGTT GGCTAAAGTT CCGCTGTTTC AGGCAAAGGA TGAAGATATT
GTTGAGAACA GAATTTTAAA AAAGAAAAAA CCGGATCTGG AATGCATTAC CAGATTCAAT
ATCAATGGGT ACCCACACTT ACTGATCCTT GGATCAGGCT CTAAATCGCC GCGCCGCGAT
GTTGCCTACC TGGTAAAATT ACCGACACCT TACAATAAAA AACATTTGGT ATGGGAAATA
TCATTAGTGA AATGGTATGC CTTTTTACGA ATGAATGAAG ATGTAACAGG CATAAGCGGC
GTATTAAATT TTGAAGCTGC CGCTGCAACA GAAACATATC TATATGTTTT CAATCGTGAA
AATAATGCGA TCCTGCGCTT CGATCTGGTA GAATTTGTTG AATTTATTCA GGGCCACACA
GATGGTGTTC CATTCCCAAC CATTATTACA TCCGAACTGC CGGAAATAGA AACTATCCGC
GCAGGATTTT CCGGCGCAGA TTATTTTGAT CAGAAACTAT TTTTCACTGC TGCTGCTGAA
AACACATCTA ATGCAATAGA CGATGGTGCC ATCATGGGCA GCGCGGTTGG CATCTTGTCC
CTTGATGGGG AAGAAAAAAT GCGTGGCAAG CTCGCGAGTG GATTTGTCGG TCATGTTTCT
GCGTATACGC TCATTCCTGA AATAAACGGC TTACCGCTGA AAATTGAATC GATTTCTATT
TACGAAAAGG AAGGAGAAAA TTCATACATA GCCCTGGCAG TAAGTGACGA CGACATGGGC
GGATCAGATA TTTTAATGCT CCAATTAGAT CTCTAA
 
Protein sequence
MHLSVLKHVH LTSIPSASAV EVVNGNIYIV GDDSSFLYVL KYDLTVLAKV PLFQAKDEDI 
VENRILKKKK PDLECITRFN INGYPHLLIL GSGSKSPRRD VAYLVKLPTP YNKKHLVWEI
SLVKWYAFLR MNEDVTGISG VLNFEAAAAT ETYLYVFNRE NNAILRFDLV EFVEFIQGHT
DGVPFPTIIT SELPEIETIR AGFSGADYFD QKLFFTAAAE NTSNAIDDGA IMGSAVGILS
LDGEEKMRGK LASGFVGHVS AYTLIPEING LPLKIESISI YEKEGENSYI ALAVSDDDMG
GSDILMLQLD L