Gene CHU_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3379 
Symbol 
ID4187168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3860141 
End bp3860923 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content41% 
IMG OID638073369 
Producthypothetical protein 
Protein accessionYP_679958 
Protein GI110639748 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.063845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGGGT TAAAAACAAA AGTAGATAAA AGTAACGTTG TTGAGAATAA TCCCAACGTT 
ATGCCGGAAG AACAAAACGA AGAGCGATTT TTTTTAGAAG GTCCAAAATC ACGTTGGAAA
GAATTTAAAT TCCTGCTGCA TATTATCTGG GATTTCCTGG TCGGATTCAG GGTACTGCAT
TTTGCAGGAC CCTGTGTAAC CGTATTTGGA TCTGCCCGCT TTAAGGAAGA TCACGAATAT
TATAAAAAAT CGTTTGAAGT GGGGGCGGCA GTTGCCGGCC TGGGTTTCAC GGTTATGACC
GGGGGCGGGC CGGGTGTTAT GGAAGCTGCA AACAAAGGAG CTAAAAAGGG CGGTGGCAGA
TCGGTAGGCT GTAACATTAT TTTACCAATG GAACAATACG CCAACCCATG GTTAGACCTG
AGTGTAAACA TAAAATACTT CTTTGTACGA AAAGTTCTTT TATGTAAATA TTCTTATGCC
TTTGTTTGTA TGCCAGGTGG TATGGGAACA CTGGATGAAT TCTTTGAAGC CGTAACGTTG
GTACAGACCA ATAAGATCAA ACGTTTCCCG ATTGTATTAT TCGGAAAAGA GTACCACAAA
CATTTGTACA AGCATCTTGA GTATATGGCT GAAGCGGGAA CAATATCACC GAAAGATCTT
GAACTGTTTT TGTTTACAGA CGACATTCAC GAAATGGAAA ATCACCTAAG CAAATATGCA
GTAGATGCCT TTGGTCTGAA AAAAGTTACA AAGCCAAAAC GCTGGATGAT CTTCGGAGAA
TAA
 
Protein sequence
MLGLKTKVDK SNVVENNPNV MPEEQNEERF FLEGPKSRWK EFKFLLHIIW DFLVGFRVLH 
FAGPCVTVFG SARFKEDHEY YKKSFEVGAA VAGLGFTVMT GGGPGVMEAA NKGAKKGGGR
SVGCNIILPM EQYANPWLDL SVNIKYFFVR KVLLCKYSYA FVCMPGGMGT LDEFFEAVTL
VQTNKIKRFP IVLFGKEYHK HLYKHLEYMA EAGTISPKDL ELFLFTDDIH EMENHLSKYA
VDAFGLKKVT KPKRWMIFGE