Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3379 |
Symbol | |
ID | 4187168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3860141 |
End bp | 3860923 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638073369 |
Product | hypothetical protein |
Protein accession | YP_679958 |
Protein GI | 110639748 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.063845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGGGT TAAAAACAAA AGTAGATAAA AGTAACGTTG TTGAGAATAA TCCCAACGTT ATGCCGGAAG AACAAAACGA AGAGCGATTT TTTTTAGAAG GTCCAAAATC ACGTTGGAAA GAATTTAAAT TCCTGCTGCA TATTATCTGG GATTTCCTGG TCGGATTCAG GGTACTGCAT TTTGCAGGAC CCTGTGTAAC CGTATTTGGA TCTGCCCGCT TTAAGGAAGA TCACGAATAT TATAAAAAAT CGTTTGAAGT GGGGGCGGCA GTTGCCGGCC TGGGTTTCAC GGTTATGACC GGGGGCGGGC CGGGTGTTAT GGAAGCTGCA AACAAAGGAG CTAAAAAGGG CGGTGGCAGA TCGGTAGGCT GTAACATTAT TTTACCAATG GAACAATACG CCAACCCATG GTTAGACCTG AGTGTAAACA TAAAATACTT CTTTGTACGA AAAGTTCTTT TATGTAAATA TTCTTATGCC TTTGTTTGTA TGCCAGGTGG TATGGGAACA CTGGATGAAT TCTTTGAAGC CGTAACGTTG GTACAGACCA ATAAGATCAA ACGTTTCCCG ATTGTATTAT TCGGAAAAGA GTACCACAAA CATTTGTACA AGCATCTTGA GTATATGGCT GAAGCGGGAA CAATATCACC GAAAGATCTT GAACTGTTTT TGTTTACAGA CGACATTCAC GAAATGGAAA ATCACCTAAG CAAATATGCA GTAGATGCCT TTGGTCTGAA AAAAGTTACA AAGCCAAAAC GCTGGATGAT CTTCGGAGAA TAA
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Protein sequence | MLGLKTKVDK SNVVENNPNV MPEEQNEERF FLEGPKSRWK EFKFLLHIIW DFLVGFRVLH FAGPCVTVFG SARFKEDHEY YKKSFEVGAA VAGLGFTVMT GGGPGVMEAA NKGAKKGGGR SVGCNIILPM EQYANPWLDL SVNIKYFFVR KVLLCKYSYA FVCMPGGMGT LDEFFEAVTL VQTNKIKRFP IVLFGKEYHK HLYKHLEYMA EAGTISPKDL ELFLFTDDIH EMENHLSKYA VDAFGLKKVT KPKRWMIFGE
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