| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3361 |
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| Symbol | sucB |
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| ID | 4185056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3839626 |
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| End bp | 3841170 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638073351 |
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| Product | 2-oxoglutarate dehydrogenase E2 component |
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| Protein accession | YP_679940 |
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| Protein GI | 110639730 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0327503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTG AAGTAAAAGT ACCTACAGTA GGTGAATCCA TCACAGAAGT AACCATCGGA
AGATGGAATA AAAAAGATGG AGAGTTTGTA GATGTAAACG AATTGATTTG CGAGATCGAA
TCAGACAAAG CAACGTTTGA ATTAAATGCT GAGAAATCAG GTATCTTAAA ATTAAACGCG
AAGGAAGGCG ATACAGTAGC AATTGGCACT GTTATCTGTT CCATCGAAGA AGGTGCAGGT
TCTGCCGCTG CCAAACCGGC AGCAAATGCA GCTCCTGCAG CAGCGCCAGC GGCTACTCCG
GCAGCACCAG CTCCGGCAGC ATCTAATGCA GCACCGGTAG AAGTTAAAAT ACCAACCGTT
GGCGAATCCA TTACAGAAGT AACCTTAGGT GCATGGTCTG TTAAATCAGG CGATGCAGTA
AAGGCTGGTG ATCTGTTATT GGAAATAGAA TCAGACAAAG CAACATTTGA ATTGCATGCT
GAAACAACAG GTACAATAGA AATATTATCT AAATCCGGCG ATACAGTAGC GATCGGAACA
GTCGTTTGCA AAATCGTTCC GGGTGCGGGC GGTGCTTCAC AGGCAGCAGC TCCAGCTTCT
GCGCCGGCAG CAACAGCAGC AGCTTCATCT GGCGGCGCAA ACTATGCAGG AGGGCATGCT
TCTCCGGCAG CTGGTAAAAT ATTAAATGAA AAAGGCGTTG ATGCTTCTGC GGTTGCAGGT
TCAGGTAAAG ATGGCCGCAT TACAAAAGAA GACGCACTGA AAGCATCTGC AGCTCCGGCA
GCAGCAGCAA AACCAGCAGC AGCAGCTTCA ACAGCGGCTC CGGCAGCTAA AGCATCAGCA
GCGGGCCGTG CAGACGACCG CGTAAAAATG ACAAGCCTTC GTAAAACCAT TGCACGCCGT
TTGGTTGCCG TGAAAAACGA AACAGCCATG CTTACTACGT TCAACGAAGT AGACATGAAG
CCTGTTATGG ACATGCGTTC TAAATACAAG GATACCTTCA AGGAAAAATA CGGCATTGGC
TTAGGCTTTA TGTCATTCTT CACGAAAGCG GTATGTATGG CGCTTCAGGA ATTCCCTGCC
GTAAACGCAT ACATCGATGG AGATGAAATT GTATACCATA ACTTCTGTGA CGTATCGGTA
GCGGTATCTA CGCCGAAAGG TTTAGTAGTT CCTGTAATCC GTAATGCGGA AACAATGAGC
TTCAATGAGA TCGAAGCAGA GATCGTACGT TTGGCAACAC GCGCACGTGA CGGTAAATTA
AGCATCGACG AAATGTCTGG CGGTACATTT ACCATCACAA ACGGTGGTAT CTTCGGTTCT
ATGTTGTCTA CACCGATCAT CAACTCACCG CAATCTGCGA TCTTAGGTAT GCACAACATC
GTTGAGCGTC CGGTAGCAGT AGGCGGACAG GTAGTGATCC GTCCGATCAT GTACTTAGCA
CTTTCTTACG ATCACCGTAT CATTGACGGC CGTGAGTCTG TAGGTTTCCT GGTACGTGTG
AAACAATTGC TGGAAGATCC GAGCAGATTG TTACTAGGAG TTTAA
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| Protein sequence | MAFEVKVPTV GESITEVTIG RWNKKDGEFV DVNELICEIE SDKATFELNA EKSGILKLNA
KEGDTVAIGT VICSIEEGAG SAAAKPAANA APAAAPAATP AAPAPAASNA APVEVKIPTV
GESITEVTLG AWSVKSGDAV KAGDLLLEIE SDKATFELHA ETTGTIEILS KSGDTVAIGT
VVCKIVPGAG GASQAAAPAS APAATAAASS GGANYAGGHA SPAAGKILNE KGVDASAVAG
SGKDGRITKE DALKASAAPA AAAKPAAAAS TAAPAAKASA AGRADDRVKM TSLRKTIARR
LVAVKNETAM LTTFNEVDMK PVMDMRSKYK DTFKEKYGIG LGFMSFFTKA VCMALQEFPA
VNAYIDGDEI VYHNFCDVSV AVSTPKGLVV PVIRNAETMS FNEIEAEIVR LATRARDGKL
SIDEMSGGTF TITNGGIFGS MLSTPIINSP QSAILGMHNI VERPVAVGGQ VVIRPIMYLA
LSYDHRIIDG RESVGFLVRV KQLLEDPSRL LLGV
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