Gene CHU_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3332 
Symbol 
ID4184582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3801850 
End bp3802524 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content40% 
IMG OID638073321 
Producthypothetical protein 
Protein accessionYP_679911 
Protein GI110639701 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA AAGCTATAAT CACCGGCGCT ACGGGTATGG TAGGTGAAGG CGTTATGCAC 
GAATGCCTGC TGAATCCGGA TGTGGAAGAA GTACTTATCA TCAACCGCAA ACCTTCCGGC
TTTACACATG CTAAATTAAA AGAAATCATT CACACCGATT TCTTTAACCT AGCTCCAGTC
GAACAACAAC TCGCAGGCTA TAATGCCTGT TATTTTTGCT TAGGCGTTTC TTCTATCGGA
ATGAATGAGG CTGACTATAC AAAAATGACA TATACATTAA CCATGCATGT TGCCGAAACA
CTTAGCCGCT TAAACAAAGA TATGACCTTC TGTTATGTAT CGGGTGCTTC TACAGACAGC
ACAGAAAAAG GAAAGTCTAT GTGGGCACGC GTAAAAGGGA AAACAGAAAA TGACCTCACC
AGACTTCCAT TTAAAGATGT ATATAATTTC AGGCCGGGCT ATATGCAGCC AACACCAGGG
CTAAAGAATA CGCAGAAATA CTATACATAC ATGAGCTGGA TGTATCCGTT TTTAAAGCTG
GTTTTTAAAA ATTATGTTTC TACCTTGAAA GATGTCGGAT TGGCAATGAT CCGTGTTACC
CTCTTCGGAC ATAACAAGCA GGTGCTGGAA GTGCCGGATA TAAAAGCATT GGCTAAAAAA
ACACAATTTG TTTAA
 
Protein sequence
MKIKAIITGA TGMVGEGVMH ECLLNPDVEE VLIINRKPSG FTHAKLKEII HTDFFNLAPV 
EQQLAGYNAC YFCLGVSSIG MNEADYTKMT YTLTMHVAET LSRLNKDMTF CYVSGASTDS
TEKGKSMWAR VKGKTENDLT RLPFKDVYNF RPGYMQPTPG LKNTQKYYTY MSWMYPFLKL
VFKNYVSTLK DVGLAMIRVT LFGHNKQVLE VPDIKALAKK TQFV