Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3332 |
Symbol | |
ID | 4184582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3801850 |
End bp | 3802524 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073321 |
Product | hypothetical protein |
Protein accession | YP_679911 |
Protein GI | 110639701 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA AAGCTATAAT CACCGGCGCT ACGGGTATGG TAGGTGAAGG CGTTATGCAC GAATGCCTGC TGAATCCGGA TGTGGAAGAA GTACTTATCA TCAACCGCAA ACCTTCCGGC TTTACACATG CTAAATTAAA AGAAATCATT CACACCGATT TCTTTAACCT AGCTCCAGTC GAACAACAAC TCGCAGGCTA TAATGCCTGT TATTTTTGCT TAGGCGTTTC TTCTATCGGA ATGAATGAGG CTGACTATAC AAAAATGACA TATACATTAA CCATGCATGT TGCCGAAACA CTTAGCCGCT TAAACAAAGA TATGACCTTC TGTTATGTAT CGGGTGCTTC TACAGACAGC ACAGAAAAAG GAAAGTCTAT GTGGGCACGC GTAAAAGGGA AAACAGAAAA TGACCTCACC AGACTTCCAT TTAAAGATGT ATATAATTTC AGGCCGGGCT ATATGCAGCC AACACCAGGG CTAAAGAATA CGCAGAAATA CTATACATAC ATGAGCTGGA TGTATCCGTT TTTAAAGCTG GTTTTTAAAA ATTATGTTTC TACCTTGAAA GATGTCGGAT TGGCAATGAT CCGTGTTACC CTCTTCGGAC ATAACAAGCA GGTGCTGGAA GTGCCGGATA TAAAAGCATT GGCTAAAAAA ACACAATTTG TTTAA
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Protein sequence | MKIKAIITGA TGMVGEGVMH ECLLNPDVEE VLIINRKPSG FTHAKLKEII HTDFFNLAPV EQQLAGYNAC YFCLGVSSIG MNEADYTKMT YTLTMHVAET LSRLNKDMTF CYVSGASTDS TEKGKSMWAR VKGKTENDLT RLPFKDVYNF RPGYMQPTPG LKNTQKYYTY MSWMYPFLKL VFKNYVSTLK DVGLAMIRVT LFGHNKQVLE VPDIKALAKK TQFV
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