Gene CHU_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3313 
Symbol 
ID4186683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3785653 
End bp3786432 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content42% 
IMG OID638073305 
Producthypothetical protein 
Protein accessionYP_679895 
Protein GI110639685 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTG TTGTTATTGG CTCAGGAAAT GTTGCATACC ATTTAATACA GGCTTTTTAC 
ACGGCAGCAG ATGTAACGCT GTTTGTACAC GCACGCAATA AGGCAGCGTT AGATGTACTT
AAACGTGAAT TTCCTGCACT TACGATTCTC TCCACCCACG ATTTAACTTC CATCAACGCA
GACCTTATAC TCATCAGCGT TAAAGATGAT GTATTGAATG CTGTGTTTGA GCAGTATTCC
TATGCACGTG AAACACTTGT GGCACATACA TCAGGTACGC AAATCCTGCA AAACACAGGC
TTTCATCAGA ATGTAGGGGT ATTTTATCCC CTGCAAACAT TCAGCCGGAC TAGTAATGTC
CGCTGGAACA ATACACCAAT ACTGATTGAA GCCGGTTCAG AAGCAGCCAT TCAAGTACTG
GAGCAGGCCG CAGCATTATT GCATGCACCA TATTTTGAAA CGGATACCGA ACAGCGAAAA
TACATCCATC TGGCGGCAGT ACTTACAAGT AACTTCGCAA ACCACCTGCT GGGTAAGGCA
GCAACAATTT TGCAGCAAAA ATCAATTGAC TATCACATTC TTCAGCCATT GGTTGAAGCC
ACGATACAGA AAGCATTTAC AAAACATCCG GTTGAGGTTC AGACTGGACC GGCGGTCAGA
AAGGATGTAT TAACAATGGA GAAACATCTT TCTTTATTAA AGGAAGATGC ATTGCTTCAA
AATATTTATC GCAACATAAG CGAAAGCATA GATAAAACAG GTAATTTAGA ATCGGAATAA
 
Protein sequence
MRIVVIGSGN VAYHLIQAFY TAADVTLFVH ARNKAALDVL KREFPALTIL STHDLTSINA 
DLILISVKDD VLNAVFEQYS YARETLVAHT SGTQILQNTG FHQNVGVFYP LQTFSRTSNV
RWNNTPILIE AGSEAAIQVL EQAAALLHAP YFETDTEQRK YIHLAAVLTS NFANHLLGKA
ATILQQKSID YHILQPLVEA TIQKAFTKHP VEVQTGPAVR KDVLTMEKHL SLLKEDALLQ
NIYRNISESI DKTGNLESE