| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3302 |
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| Symbol | |
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| ID | 4186934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3772765 |
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| End bp | 3775035 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638073294 |
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| Product | surface antigen |
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| Protein accession | YP_679884 |
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| Protein GI | 110639674 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.939122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTT TCGCTACATT ATCACTTTTT ATAATCGTAT TGGGTAGTAT TGCTCAGACA
AATTCAAATA TCCCAATTGG TGTATGGCGA ACGCATTTGC CTTCAAAATC TGCTTCAACC
ATCGCATACG CAAATAATAA GCTGTATGTC TCTTCAGCAA AAAGCAGTTT TACATTTGAT
CTTTCCGAAA ATTCCATGGA ACCACTGTCA AAAATTGACG GGCTTTCGGA ACATGAGATT
TCGGTTATCC GGTTTAATGA AGAAACGAAT ACAGGACTCA TTGGTTATAC CAGCGGAAAT
ATAGATATCA TTAAAAACGG ACGGCTTGAA AATTTTGATG TAATCTACCG GTCAAGTATT
GTTGGCTCTA AAAAAATAAA CAACATTACC ATATATAAAA CAAGAGCGTT TGTTTGCTGC
GACTACGGCG TTACAGTGAT TGACCTGGTT AGGAATGAAG TTGTAGAATC GTGGATGAAT
TTAAGAATAA ATGCATTGCC GAATATCGTA TATGCCTGTG TGCTCAATGC AACTCAGGAC
TCGGTGTTCC TGGCTACACA ATACGGTATC ATGAGTGCCT CTTACAATAA GCCGGGAATT
AATTTAATGG ATTTTGTTAA CTGGAAAGTA TACACGAATA TTTCTACCAG TCTGTCACGT
TCCGTAGGTG AACTAAATGG AAGGATTTAT GCAGGCGTTT CTACTATTGG TGTTTTTGTG
TTGAACGGAA GTTCCTGGCA AAATATCGGA TTGACACTGG ATGCAACATC CACTTGCTGG
AACCTGATTA AATCAAACAA CCAGCTTTTG GTCTGTGCCA ACAACAATCT GTATACCATT
GATAATCCTA CAACCTACAC AAAAGTCTTT ACTACAAACT CATTTAAAAA TTTACGCGAA
GCTATATATG ATCGTAAAGG AAATTTGTGG CTGGCAGATG TAAACGAAGG ATTAGTCGGT
AAAAATGGAG GTGATACCTA TTCGTATTTT CAATTAAACG GCCCTTCCAG TACTACAACG
TTCAATTTAT ATTATTATAA AAATACCATC ATCGCAAATA GCGGAGGGTA CAATAGTGTA
TACTTTCCTC AATACAGACC GGATGGATTT TATGAGTTTC AGGCGCAGGA TAAATGGAGA
AGTTACGATC AGTACAACAG TAATTATCCG CCAGGCATTG GAGATAACCT TACTTCCAGT
TACAATTCCT TTGATGATAC CTTGTATGTA GGCACCTTTG GATATGGTTA TGTCAGTTTT
CAGCAACCTA ATACCTTTGT CAGACACGAT ACAACAGACA CCCCAATGAA AACAATGAAT
GTAACGGGAA TTGATGTAGA TTCTAAAGGC ACGGTATGGT TTGCAACCTA TGGCACGCCG
GTTTTTCAGC CTAGTTTGTA CGCACGGACT AAAAAAGGTG TATGGTCCAG TTACACATTA
AATACGTCTA AAAATGAAAG CAGGTATTTA CTTCAAGTAA AAATTGATTC GGTTGGCAAT
AAATGGATGC GCTATGGAAC CAATGGAATG GATAAAGGCG TGATTGTCTT TAATGAAAAA
AATAATCAGG TGCGCTATTT TACAACCTCT TCCACACAAG GCAACTTACC AAGTAATCGG
ATTAACTGTA TAGATATTGA CCAGAAAGGT GTAGTGTGGG TTGGAAGTGA GCAGGGACTT
TCCGCATTTT ATGATCCGTC AAGAGCCTTT TCCGGATCTT TTTCTGCGCC TATTTATAAT
GGGTTTGGGG TATTGTTTGA TAAAAATGTT ACGTGCATTA AATCAGATGG CGGTAACCGT
AAATGGGTTG GTACAACGGA AGGCTTGTGG TTATTCAATG ATAATTTTAC AGAAGCACTT
GCCTTTTATA CAATTAATAA CAGCCCGTTG TATTCGAACA ATATTGTTTC TATTGATATT
CATGCGATCA CAGGTGAGGT ATTTATTGCT ACAGATAAAG GAATTATTTC ATACAGATCA
GATGCTACGG AAAGCAACAA AGATTTCAGT GAAGCTAAAA TCTTCCCTAA TCCGGTGCGC
CCCGGGTATA GCGGTGTAAT AACCATTGAA GGGCTAAAGG ATAATGTGAT GGTTAAAATT
ACAGATATGC AGGGAAAACT ATTTTACGAA GCAAAATCGA ATGGCGGTAC TGCAACCTGG
AACATGATTA ATTATGCCGG CATTAAAGCA GAGACAGGAA TGTATTTAGT GTTTGCCACA
ACCGATAAAG GGGAAGAAAA ATTTGTTGGT AAAATAGCAA TTGTTCAATA A
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| Protein sequence | MRLFATLSLF IIVLGSIAQT NSNIPIGVWR THLPSKSAST IAYANNKLYV SSAKSSFTFD
LSENSMEPLS KIDGLSEHEI SVIRFNEETN TGLIGYTSGN IDIIKNGRLE NFDVIYRSSI
VGSKKINNIT IYKTRAFVCC DYGVTVIDLV RNEVVESWMN LRINALPNIV YACVLNATQD
SVFLATQYGI MSASYNKPGI NLMDFVNWKV YTNISTSLSR SVGELNGRIY AGVSTIGVFV
LNGSSWQNIG LTLDATSTCW NLIKSNNQLL VCANNNLYTI DNPTTYTKVF TTNSFKNLRE
AIYDRKGNLW LADVNEGLVG KNGGDTYSYF QLNGPSSTTT FNLYYYKNTI IANSGGYNSV
YFPQYRPDGF YEFQAQDKWR SYDQYNSNYP PGIGDNLTSS YNSFDDTLYV GTFGYGYVSF
QQPNTFVRHD TTDTPMKTMN VTGIDVDSKG TVWFATYGTP VFQPSLYART KKGVWSSYTL
NTSKNESRYL LQVKIDSVGN KWMRYGTNGM DKGVIVFNEK NNQVRYFTTS STQGNLPSNR
INCIDIDQKG VVWVGSEQGL SAFYDPSRAF SGSFSAPIYN GFGVLFDKNV TCIKSDGGNR
KWVGTTEGLW LFNDNFTEAL AFYTINNSPL YSNNIVSIDI HAITGEVFIA TDKGIISYRS
DATESNKDFS EAKIFPNPVR PGYSGVITIE GLKDNVMVKI TDMQGKLFYE AKSNGGTATW
NMINYAGIKA ETGMYLVFAT TDKGEEKFVG KIAIVQ
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