Gene CHU_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3300 
Symbol 
ID4186932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3771262 
End bp3772080 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content37% 
IMG OID638073292 
Producthypothetical protein 
Protein accessionYP_679882 
Protein GI110639672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.765579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA GTTTTATAAG CCTTGCTCTT ATTGCAGCTT TATTTGCCTG CGAAAATCCG 
AAAGAAAGCC CTACAGAAAA AGGTGCCGAT TCATCTGATG TGATCCTTAA CGATTCCACA
TCTTTAGGGG AGGTTAAAGA AATTGAACTT GTTCCGCTAA AGGATTCTCC TGAATTTTCA
GATGCTATTT TAGAATTAAA TGCACCTGAA GATGGCTCTG TTCAAAAGTC GAACAAAGTA
ACATTCAACT ATGAAATAAA AAATTATCAA TTAGCTAAAC CTACGGTTGA AGGCTCTTGC
GCGATCAGCT GTGCGAACTC AGATAAAGGA CAGCATATTC ACTTAATATT AAACAATGCA
CCTTATTTAG CTAAATACGA ACCATCATTC ACGGATAGCT TACCGGATGG GAATTACATT
GCGTTATCTT TTCTTTCCCG TTCATACCAC GAAAGCTTAA AGCATTTTGG CGCTTCTGAT
GTAAGACAGT TTACGGTTGG TAAAGTAGCA AAAGAAAAAA TTGACCTTTC AAAGCCGATG
CTTTTTTACA GCAGACCTAA AGGAGAGTAC AAAGGAAAAG ATACTGAAAA TGTATTATTG
GATTTCTTCC TTACAAATAC CGTTTTATCT GAAAAAGGTA ATAAAGTACG TGCTACCATC
AATGGTAAAA CATTCCTTAT TACAGACTGG AGAGGTTATA TTCTTAAAGG GTTACCAATG
GGTGAGTCAA CAATCAAGTT AGAATTGCTT GATGCCTCAG AAAATCCGAT CCCGGGTAAA
TACAATGTTG TTGAGCGTAC CATTACGCTT ACTAAATAA
 
Protein sequence
MKKSFISLAL IAALFACENP KESPTEKGAD SSDVILNDST SLGEVKEIEL VPLKDSPEFS 
DAILELNAPE DGSVQKSNKV TFNYEIKNYQ LAKPTVEGSC AISCANSDKG QHIHLILNNA
PYLAKYEPSF TDSLPDGNYI ALSFLSRSYH ESLKHFGASD VRQFTVGKVA KEKIDLSKPM
LFYSRPKGEY KGKDTENVLL DFFLTNTVLS EKGNKVRATI NGKTFLITDW RGYILKGLPM
GESTIKLELL DASENPIPGK YNVVERTITL TK