Gene CHU_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3102 
Symbol 
ID4186552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3539984 
End bp3541780 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content36% 
IMG OID638073090 
Producthypothetical protein 
Protein accessionYP_679684 
Protein GI110639475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA AAATTTTACT TGTTGCTGCA GTTATTTTCC TTTATGCACG ATTTATATCC 
GCACAGACAA CAGGTACATT TATAGTTGCA GATAAAGGAA ACAGTATGTA TTCCTGTGAA
GATACATTAA TCACTTTTGA ACAGATTTTT AATAAAACAG GTATCCGGGA TTTAAATGAT
GCGAATGATA ATATAAGCAA GTATAAAATG TTCCGGCTGG ATGGTATAAT TGTTACAAAC
GATGAGATTA CAGCTCCTTT TAAATATAGC ACCTATGATA GAGTACATAT TCAAAAAACG
GGTGCTGATC CGATTCTGAA TAGTGCAGTA GTAATAGATT TTTCCATTAT TACTCCGCCA
ACATCTCTAT TCGCGGTAGA TACATTAACC TATATGGTTG ATAAAGGAGA GAAAGTAAAT
TTCGCAAACG ACTTTTTTAC CAATGTGAAA TTTTGGAGTA GTGGTAATAA TATTCTGGAT
TTAAATCACA GGCTTACTTT TACAGATCTG TCCACAGGTA TTCAAACTCC TATGACAGAA
GATTTTGAAA GTATTGTTGG CAAAGGCAAA TATAAAATCC GGCAACAGGT GTCTGTATGC
AGCCCCTACG ATTATTACTA TGACAGCATA TATGTAATCG TGGAAGAAAG TCCTTGCCAT
TCAATAGCTA TAAAAAATGT ACCTTCTGTT TGCAGAGAAG ACATAATAGA TATCCGCCCA
TATGTATTTG TTGATGGCAT AGCAGCAACT CCTGCCCAAC TGGAAGACAT GATCTATTGG
AATAGAAGCA ATATATTTGA CCAGGAATCC GGACTGCCGA TGAATCCTGC CTCCATGGAT
ATGAAGGATA TGTTTAATAA GACAGATTTA TTTCCCTATG TTGAAATAGG CTATCAGCCC
AATATTGACA TGAATATATG TGAAAATTAT TTTTATACAT TTAATCTGAA AGTTCCCTCA
AAAATTCCTA AAACGGAAAG TGTGTTTGCA AAAACAAATT ATGACGAGGA AGAAATTTTT
AAGATAACGG GTACATATTA TGGATTCAAT AATCAATTCA ATACAGATAT TCTAAAAAAA
CTTTATCTGG ATAATTATAC CATTTTTGAA GGAACCGCAT TTAATTATTT CAGAGATCAA
ACGTATACCC TACCGGTAAG CGGTACCGTC ATTGAGCCGG GAACATATTA CGTGGTGGCT
GTAAATGAAA TGTGTGGGAA TGATAGTTCT GGGTTTGTTG TTACTATTCA GAATAAAGAT
TTCGATATTC AATGGAAGGC CGCTGAAAGT TTAGGCAAAG GATATTATAT TTTTACAGCG
CCTGTATATA GCGGTGCCAC CTACAACTGG TCTGCATGGG GCGGCTTTAT CGTATCCGGA
AGAAATACGA ATGAGGTCAT CGTTTATTAT TCAGAACAGG CAGCATCTAC AGTAACAACT
TCGTGTGTAA TAACACTTGC AAACGCACGC ACTGCAGGCA ATGGGGGAAT GAGTTCTGCT
GTATATATAA CAACGAATGA TAACAGCAGG GAAGAGATAA CATTAGATGC ACGTTTGCCG
GATGTATCAT TGAATAAGAA TGTTTCTTTT GCATACCCAA ATCCGGCTGC GGGAACCTTT
GCTGTAACCG GTAACGGTAA ATATGAAATA ATGGTTTATA ACAATATCGG GAAGCTTGTT
TATGCAAACG ATGCGTATGA AGCAAATGAT CCTGTAGCTA TTACCGGTAA AGGAATGTAT
AGTGTATGTA TTACGCAGGA GGGGATTAAA CAATCTTTAA AAGTAATCAT AGAATAA
 
Protein sequence
MKIKILLVAA VIFLYARFIS AQTTGTFIVA DKGNSMYSCE DTLITFEQIF NKTGIRDLND 
ANDNISKYKM FRLDGIIVTN DEITAPFKYS TYDRVHIQKT GADPILNSAV VIDFSIITPP
TSLFAVDTLT YMVDKGEKVN FANDFFTNVK FWSSGNNILD LNHRLTFTDL STGIQTPMTE
DFESIVGKGK YKIRQQVSVC SPYDYYYDSI YVIVEESPCH SIAIKNVPSV CREDIIDIRP
YVFVDGIAAT PAQLEDMIYW NRSNIFDQES GLPMNPASMD MKDMFNKTDL FPYVEIGYQP
NIDMNICENY FYTFNLKVPS KIPKTESVFA KTNYDEEEIF KITGTYYGFN NQFNTDILKK
LYLDNYTIFE GTAFNYFRDQ TYTLPVSGTV IEPGTYYVVA VNEMCGNDSS GFVVTIQNKD
FDIQWKAAES LGKGYYIFTA PVYSGATYNW SAWGGFIVSG RNTNEVIVYY SEQAASTVTT
SCVITLANAR TAGNGGMSSA VYITTNDNSR EEITLDARLP DVSLNKNVSF AYPNPAAGTF
AVTGNGKYEI MVYNNIGKLV YANDAYEAND PVAITGKGMY SVCITQEGIK QSLKVIIE