Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3002 |
Symbol | |
ID | 4183735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3443647 |
End bp | 3444909 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638072991 |
Product | permease |
Protein accession | YP_679585 |
Protein GI | 110639376 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.310347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0270775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAT CATTCGTTCT GTTTTTTCTT TTATTTTGTA CATTATTGAC CTTATCTGTA AACAAGCATA TCCGCAGGGA TATTTTCACC TATAAAAGTG AGATATGGGG AGATAAAGCA GGTTACTATA TTTATTTACC GGCATTGTTT GAATATAATT TTGATGCGCA GAAAATGCCT GCAGCTATTG AAGCAAACAC AGGTAATGGT TTTATCCTAA ACGGCCATAC CATTATAACA AAATATCCGG CAGGAGAAGC TATAATGATT GCCCCCTTCT GGCTGATCAA CAAACTAGTC AACCCTTCCG ATTCGCCTTT CGATAAATCA TATCATTATA CAATAGATGT TGCTGCGGCC TTTTATACAG CCTTAGGCCT GCTGCTTTCG TTTATAATAT TTAAAAAATA CACTTCGATT CCATATGCAT CGTTGCTTTG TGCCGCCATG CTGCTCAGTA CAAATCTGCT GTATTATAGT ATTGATGAAA CAGGAATGTC ACATGCATAC TCTTTTATTC TTTTTACAGC ATTATTATTT ATAGGCATTA ACCTGACGGA TTATTTATCG CTCAAACCCA TCAAAACACT TATTTCGCTG GGCTTACTGG GCGGTATGAT TTTTCTGGTG CGCCATGTGA ATATACTTTT TTTTATCCCG GTTTTATTGG TTACACAAAA CAGCCTAAGT GAAATCCGGA TCACAGCAAA AAAAATATTT TTTTCTAAAA TAAGTACAAT CATGTATGGC ATCATGTTCC TTATTGTACT ACCTCAACTC TTTTATTATT ATTATATAAA TTCAACTGTT TCAGCAACAC CTTATTATGG CGAAGGTTTT TTTTACGTCT TCAGCCCAAA GATACTGGAA GTCTTATTCG CACCTGAAAA TGGCGTTTTC ATATATTCCC CATTTTTATT GGTTGTTTTA TTATGGAATA TATCCTCGTA TTCGTTTAAA AAACCTATTA TTTTTATGCC TTATCTGCTC TTTTTTAGTG TTATATATCT ATATGCCTCC TGGAGCAGTT ATGAACTTGG CTGTGGTTTA GGACACAGGA GTTTAGTAGA ATTTTATCCT TTCCTGTTCC TTCCTTTAGC GAATAGATTA AATAAACAGA AAATATCAAT TATATTTGTA CTTCTGTTTA CACTATGCAG TTTTTACACA TTAAAAATGA TGTATAGTTT TGATGGTTGT TTTGGTTCAC TGGATTGGGA TTGGCAGCAA TATTACCGTC ATCTTATCAG CCCGGTAAAA TAA
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Protein sequence | MLKSFVLFFL LFCTLLTLSV NKHIRRDIFT YKSEIWGDKA GYYIYLPALF EYNFDAQKMP AAIEANTGNG FILNGHTIIT KYPAGEAIMI APFWLINKLV NPSDSPFDKS YHYTIDVAAA FYTALGLLLS FIIFKKYTSI PYASLLCAAM LLSTNLLYYS IDETGMSHAY SFILFTALLF IGINLTDYLS LKPIKTLISL GLLGGMIFLV RHVNILFFIP VLLVTQNSLS EIRITAKKIF FSKISTIMYG IMFLIVLPQL FYYYYINSTV SATPYYGEGF FYVFSPKILE VLFAPENGVF IYSPFLLVVL LWNISSYSFK KPIIFMPYLL FFSVIYLYAS WSSYELGCGL GHRSLVEFYP FLFLPLANRL NKQKISIIFV LLFTLCSFYT LKMMYSFDGC FGSLDWDWQQ YYRHLISPVK
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