Gene CHU_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2904 
Symbol 
ID4185075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3324070 
End bp3325482 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content46% 
IMG OID638072892 
Producthypothetical protein 
Protein accessionYP_679491 
Protein GI110639282 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0776011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGGG ATGATCTGAA AGCGATCGGT TATGCGGAAG GAAAAGTCAT CCGCATGGTA 
CTTGATATTA TTGAAAATAA TTATGCTTCC CAGGAGAAAG AAGAAGTACT GAATCTGTTT
AAGCAGGTTG TATTACACCC GGAACAGTTT CTGGATCATG CCGTATTAAA ACACATTGCA
CAGACACTTA TTGAAGATAC TCAAGGAGCA GAAACGGATC GTATTCCCTT AAAAGAAACA
GGTATTAACT ATGCTGTTTT TGGAGCAGAT TATATTGAAG CCGGGGCTGT TAAGCAAATG
GAAATAGCGA TGAAACTTCC GGTAGCCGTT GCCGGTGCAT TGATGCCGGA TGCACACCAG
GGATATGGAT TACCGATCGG TGGTGTGCTG GCCACAAAAA ATGCGATTAT TCCTTACGGA
GTTGGTGTTG ATATCGGCTG CCGTATGGCC TTGTCCATCT ATGATATTCC TGCCGAATAT
TTTCTTGCCA ATGAAGCCAT GTATAAAAGA GAACTTATTG CCTGGACTTC CTTTGGCGCC
GGTAACGGCT GGAACGGAAA AGACCGTGCA GCCCATGCCG TGCTGGATGA TGCAGCATTT
AATATGACAC CGTTCATAAA AAATCTGCAG GATAAAGCTG CGCATCAGTT AGGTTCTTCA
GGGGGTGGTA ACCACTTTGT AGAATTTGGT ATCATTGAAT TTAAAACCGA TGATGTTAAA
CTGAACATAA AAAAAGGCAC GTATGTAGCC TTGCTGACAC ATTCCGGTTC ACGCGGTTTT
GGTGCTACCG TAGCGGGGAA TTACACCAGA CTGGCAAAAG AAATCTGTAA ACTTCCGAAC
GAAGCTGCAA ACCTTGCCTA CCTGGATATG AATCGTGCCG AAGGTCAGGA ATACTGGCTT
GCGATGAACC TTGCCGGTGA TTATGCATCT GCCTGCCATG AGATCATCCA CGAACGTTTA
ACAAAAGCCA TAGGCGGGCA GATACTGGCA AAGGTGGAGA ACCATCATAA TTTTGCCTGG
AAGGAAATGC TGAATGGAGA AGAAGTTATT GTACATCGTA AAGGCGCCAC ACCAGCTGCA
GAAGGTGTCA TGGGTATCAT TCCCGGTTCT ATGACCGCAC CAGGTTTTCT TGTACGGGGC
AAAGGTGAAG CAGCTGCGAT CCACTCTGCC TCACATGGAG CTGGCCGTCA GATGAGCCGT
ACACAGGCAA TTAAAAACAT TTCTAAAGAG GAAATGCGTA AGATCCTGAA AGATCACGGT
GTAACCTTGA TTGGTGCCGG TCTGGATGAA GCACCCATGG CCTATAAAAA TATTGAACGG
GTAATGGCGG CACAAAAACA ATTGGTAGAT GTTGTGGCTA CATTTACACC TAAGCTGGTG
CGTATGGCTG CCGATGGAAG CCGTGAAGAT TAG
 
Protein sequence
MNGDDLKAIG YAEGKVIRMV LDIIENNYAS QEKEEVLNLF KQVVLHPEQF LDHAVLKHIA 
QTLIEDTQGA ETDRIPLKET GINYAVFGAD YIEAGAVKQM EIAMKLPVAV AGALMPDAHQ
GYGLPIGGVL ATKNAIIPYG VGVDIGCRMA LSIYDIPAEY FLANEAMYKR ELIAWTSFGA
GNGWNGKDRA AHAVLDDAAF NMTPFIKNLQ DKAAHQLGSS GGGNHFVEFG IIEFKTDDVK
LNIKKGTYVA LLTHSGSRGF GATVAGNYTR LAKEICKLPN EAANLAYLDM NRAEGQEYWL
AMNLAGDYAS ACHEIIHERL TKAIGGQILA KVENHHNFAW KEMLNGEEVI VHRKGATPAA
EGVMGIIPGS MTAPGFLVRG KGEAAAIHSA SHGAGRQMSR TQAIKNISKE EMRKILKDHG
VTLIGAGLDE APMAYKNIER VMAAQKQLVD VVATFTPKLV RMAADGSRED