Gene CHU_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2802 
SymbolbglC 
ID4187187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3197559 
End bp3198596 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content40% 
IMG OID638072791 
Productb-glucosidase 
Protein accessionYP_679392 
Protein GI110639183 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.790099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.396341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGC GACTCATTCT TTCTTTACTT ATTCTTAGTT CCATACACGT ATATGCGCAG 
GAGAAGCCTT ACCTGGGGGC TGAAATCCGT ACGATAGAAA CGTTTTTGTA CGGTAAGTTT
GAAGTACGCA TGAAACCTGC TGAAGCAAGC GGTATCATCT ATTCATTTTT TACCTTTTAC
GATGAAGCAG ATTTTGCTAC CAGCTGGAAT GAAATTGATA TAGAAGTGTT AGGACGCTAT
TCAAACGAAG TGCAGTTCAA TGCCATTACC GGCAATCACC TGATGTCTGA AAAGCGCTAC
GTGCTGCCAT TCAACCCGCA CGAAAATTTT CACGATTATG CTTTTACCTG GACACCGCAA
TACATTGCCT GGTCGGTAGA TGGGGCAGAG GTATACCGCT TAACGGGTAA TGCAGCTGTT
AAAATGAATC ACCCGCAAAA ATTAATGATG AACATCTGGC CAAGCAGTGC CGTTGGCTGG
GCAGGCAAAA TAGATGTAAC TAAATTTCCG CTGGAAGCCG GATATGATTA TGTTAAATAT
TATACCTATC AGCCCGCATC AAAAGATACG TTTAAATTAA AGTGGACAGA TAATTTTGAT
AAACTGGATT ATGGTCGCTG GCAATTGGCA ACACATACGT TTGATACAAA TGAATGTGTA
TTCACTCCGG ATAACGCTGT AGTAGAAGAG GGGATTTTAA AACTCAAACT TACAAAGCCG
GTAGATGAAG AGATCGTACC GCTGCCTACG CAATTTATTG AGTCGGCAAC GTGTATACCG
AACAGGTCAA AAAAATATGC GATGTACATT CCTGTGAAAG TTAAATTTTA CGCACCCATG
AGCCGTGTGT ATTACAACCC CGAATTCTTT ACAGTAAGTG AAGGTGTTGT GAAGCATGTG
TATTTTGATG TAGATCGGAC GTATGTAATT TTATATGTGG ATGGATTGGA TATCCGTAAA
ATCAAAACAC AAAAAGTTTT TTATAAACCT GCTAGTTCCG ATGCAGAAAA GTTTATACAG
GATGTTATAA TTAAATAG
 
Protein sequence
MFKRLILSLL ILSSIHVYAQ EKPYLGAEIR TIETFLYGKF EVRMKPAEAS GIIYSFFTFY 
DEADFATSWN EIDIEVLGRY SNEVQFNAIT GNHLMSEKRY VLPFNPHENF HDYAFTWTPQ
YIAWSVDGAE VYRLTGNAAV KMNHPQKLMM NIWPSSAVGW AGKIDVTKFP LEAGYDYVKY
YTYQPASKDT FKLKWTDNFD KLDYGRWQLA THTFDTNECV FTPDNAVVEE GILKLKLTKP
VDEEIVPLPT QFIESATCIP NRSKKYAMYI PVKVKFYAPM SRVYYNPEFF TVSEGVVKHV
YFDVDRTYVI LYVDGLDIRK IKTQKVFYKP ASSDAEKFIQ DVIIK