| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2792 |
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| Symbol | |
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| ID | 4186281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3181386 |
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| End bp | 3182819 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638072781 |
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| Product | peptidoglycan-binding lytic transglycosylase-related protein |
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| Protein accession | YP_679383 |
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| Protein GI | 110639174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0340285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGG TTGTTATTTT TATTCCACTT CTGATATTTT TTTATTGTTG CCAATCAGCA
AAAAAAGAAT TCCCCAATGA GGCAGTAAAT GATCTATTAC TAGATTCTTC AGGTATTTTA
ATATATAAAA CAGAGCCGCA CATAGATGAT CCGGTGGTAT TGAATCCACT TAAAACAAAG
AAACTAAAAC TGTTGATCGT AAATAATGCC AATACGTTTT TTGTTTATAA AGGAGAAGCT
TTTGGTTTAG AATATGAACT GCTGAAGTTA TTTTTAAAAG AGAAAAAAAT CGATTGTGAA
ATTATATTAG TTAATAATGT AGTTTACATC CGCGATAGTC TGCATTTTTA TGGCGGGCAT
ATGGCCGCTT CAACATTTAT CATTCCTGAT AAACCAATGC CTGCTGTATG CTACAGCAAA
CCCATTTACA TGGCCGATCT GGTTTTAGTA AAACATAAAG ACCATGTGCA AAAAATAACG
AATGTAACGC TTTTAAAAGA CGCGCCTTAT GTTCACTATT TACGTACCAA CTCAAATAAG
CCATTGGATA GCTTTACCGT AACGTATACC GCTGAACTTC TTACCAAGGA ATTCCTGCTT
CGCCAAGTGA ATAAAAAAGA AATAGAAGCA ACCATTGTTG ATGCAAATGA AGCGGCAATA
GCAATGGCTG TTTTCCCCGA TCTGGTTCTT GAGAAAATAA TTGAACATAA TGCTCCCGTA
GGATTTATGT TTCATTCAGA AATGGACACC CTGCGAAGTG CATTTGATAG CTGGCTGGTC
AAAAATAAAA ACACGAGTGA TTATCAATGG ATACTTAAGA AGTACCGTTC GCTGCCAGCG
GATATTGCAG ATTTAACACA GACCCAAGGA CATTCTGTTA AAGAATTACT ATCTGTTATT
TCATTGTATG ATGATATAAT AAAAAAACAT GCAAAAGAAA TCGGGTGGGA TTGGCGTATG
GTTGCATCAC TCATTCATCA GGAGTCTCAT TTTAAACCCA ATTTAAAATC CTGGGAAGGC
GCATGTGGGT TGATGCAGGT AATGCCGCGA ACGGCTCTTA TATATGGCCG CGTATCAGAT
AAAGATATTT TCAAACCGCA GGCAAATATT ATTGCCGGCA CAAAATACAT TCGCTGGATA
GAAAATAATT ATTTTTTAGA TAGCGCTATT ACTAAATCCA ACAAAGAGAA ATTTATTTTA
GCATCTTATA ACGCAGGAGC GGGCCATGTA GAGGATGCAA GAGCCTTGTG TAAAAAATAC
AAACTTGATC CGAATGTGTG GGAAGACAAT GTTGAGAAGA TGCTGCTGGC AAAAACGCAG
CCCAAATATT ATAATGATAA GGTATGTAAA TATGGGTACT GCAGAGGCTA TGAAACAACT
GATTATGTAA ACACTATACT CAGATATTAT AAAGACTATA CCTATTATTA TTGA
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| Protein sequence | MKQVVIFIPL LIFFYCCQSA KKEFPNEAVN DLLLDSSGIL IYKTEPHIDD PVVLNPLKTK
KLKLLIVNNA NTFFVYKGEA FGLEYELLKL FLKEKKIDCE IILVNNVVYI RDSLHFYGGH
MAASTFIIPD KPMPAVCYSK PIYMADLVLV KHKDHVQKIT NVTLLKDAPY VHYLRTNSNK
PLDSFTVTYT AELLTKEFLL RQVNKKEIEA TIVDANEAAI AMAVFPDLVL EKIIEHNAPV
GFMFHSEMDT LRSAFDSWLV KNKNTSDYQW ILKKYRSLPA DIADLTQTQG HSVKELLSVI
SLYDDIIKKH AKEIGWDWRM VASLIHQESH FKPNLKSWEG ACGLMQVMPR TALIYGRVSD
KDIFKPQANI IAGTKYIRWI ENNYFLDSAI TKSNKEKFIL ASYNAGAGHV EDARALCKKY
KLDPNVWEDN VEKMLLAKTQ PKYYNDKVCK YGYCRGYETT DYVNTILRYY KDYTYYY
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