| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2785 |
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| Symbol | rcsC |
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| ID | 4186274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3177203 |
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| End bp | 3177577 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638072774 |
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| Product | sensor for ctr capsule biosynthesis, histidine kinase acting on RcsB |
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| Protein accession | YP_679376 |
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| Protein GI | 110639167 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.255534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCAA AAAAAGTATT AGTTGCTGAA GATAGTTCAG TTATTCAAAA CTTAACGAAG
AAAATTTTAC AGTTCCAGAA CTATGAAATC ACGGCTGTAA AAAATGGAAA AGAAGTTATG
AAAGAACTTG ACAAGGGTTC ATTTGATATC ATTTTGATGG ATATTAACAT GCCTCAAATG
GATGGAATGA CATGTGCGCA GGAAATCAGA AAATTATCCG ATCCGGTTAA GGCTGCGATT
CCAATTGTTG CCATAACAGG GAATGCAAAA AACTATTCCG ACGACGACTT TAAATCTGCC
GGGATCAATG CCTATTTACA GAAACCATTG GATTTTGATC GTCTGGTTGA AGTTGTAAAA
GAATATACCG CTTAA
|
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| Protein sequence | MSAKKVLVAE DSSVIQNLTK KILQFQNYEI TAVKNGKEVM KELDKGSFDI ILMDINMPQM
DGMTCAQEIR KLSDPVKAAI PIVAITGNAK NYSDDDFKSA GINAYLQKPL DFDRLVEVVK
EYTA
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