Gene CHU_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2709 
Symbol 
ID4184577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3096758 
End bp3097435 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID638072700 
ProductPorT-related protein 
Protein accessionYP_679302 
Protein GI110639093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGG TATCTCTTTT CATTTTATCT CTATGTATTG TGCTGAAAGT ACAGGCGCAA 
GACCCAAGGT GGACAAACCT GCCCTTTTAT GATGATAAAG CATTGCACTA TGGTTTTACA
TTAGGTATAA ACGGTTCCGG CTTTCAGAAT AAAGTTTCTA AAAGTTATTT TAGTGATACG
GTAACAAGTG TTTCCCCTGT CTACACACCA GGTTTTTCCT TAGGCTTTAT TGTAAATATG
CGCCTGCACG ATCATTTCGA TTTGAGACTG CTTCCTACGG TGGGTTTTTA CAGCAGAAGC
ATTCAATATG ATTTCATAAA GACTTCTGAA ATACAGACCA TTGAATCTAC TTTTGTAGAG
TTTCCCTTGC TGTTAAAATA CAAATCGCAG CGAAGAAATA ATTCAAGGCT TTATGTAACC
GGTGGTTTTA AAGCGTCTAT TGAAGCCGGC GCAAAGAAAA AACAACGGAA GTCAACAGAT
CTGCGGACAA ATGGGTTTGA TTTGTGCCTG GATATGGGAG TAGGGATGGA TATTTATTGC
CCGTTATTTA AGTTCTCTCC TGAAATACGC TATTCACATG GCTTATTAAA TCTCTTAAAT
AATGACCCAA ATGTCTATAG TTCAAGTTTA TCACGCCTGT CTTCTAATAC GATTTCATTA
TTTTTCAACT TTGAATAA
 
Protein sequence
MKSVSLFILS LCIVLKVQAQ DPRWTNLPFY DDKALHYGFT LGINGSGFQN KVSKSYFSDT 
VTSVSPVYTP GFSLGFIVNM RLHDHFDLRL LPTVGFYSRS IQYDFIKTSE IQTIESTFVE
FPLLLKYKSQ RRNNSRLYVT GGFKASIEAG AKKKQRKSTD LRTNGFDLCL DMGVGMDIYC
PLFKFSPEIR YSHGLLNLLN NDPNVYSSSL SRLSSNTISL FFNFE