Gene CHU_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2613 
SymbolnuoN 
ID4185401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2995264 
End bp2996745 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content41% 
IMG OID638072605 
ProductNADH dehydrogenase I chain N 
Protein accessionYP_679208 
Protein GI110638999 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.256859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATATAC CTATTGAAGA AATACGTCAA AGTTTAACCT ACCTGATACC GGAAGCCTGG 
CTATTATTGG GCTTGCTGAT CGTATTGTGC TTAGACATGT TTGCCGGTAC ACGGAAAAAT
ATTTATTTTA CCACAATTAC CCTGGTCGTT TTGGGTGTTA GTACCTGTTA CCTGCTGGGT
GCCTTGATCG ACCGGGACTC CTTGCCTCCA CGGACATTTA TGAATGAGAT GCTGGAACAG
AACACAGCAA TATTATTCAG TAAAATACTG CTTGGTATAA GTGGAATGAT TGGAGTTGTT
TTTATACAGA TCTCACCATC CTCGCAATGG CTGCGGGAGC GGGGAGAGAC CTATATACTG
TTGCTGGCAA TTTTAATGGG GAGTTATTTT TTAGTCGCGT CCATCAATTT ATTCATGGTG
TTTCTTTCTC TTGAACTGAT TTCTATTCCT TCTTATTTAT TGGTAGCATC GCGTTTTGAT
AAAAAAAGTA CAGAGGCCGG AATAAAATAT TTGCTCTACG GCGCTTTTGC AACGGGCGTA
ATGCTGTTCG GTATTTCATT ATTATATGGC TTAACGGCTG GCATGGATCT GTTTTCTGAT
CGCTGGATCC GTGTATTTGC CGAAGTACCT GTGTTCTCAA AATGGATTGT GCTGGGGCTG
GTATTAGCCG CATTATTCTT TAAAACTTCG TTATTCCCTT TCCATCCCTG GACACCCGAT
ACGTATGAAG GATCCGGCTG GGGAGTGTTG AATATTCTTT CTACCGTACC TAAAATTGCT
GCTTTTGTCT TTTTATTGAA GCTTTCGGCC TTATTTCAAG GTTTTCAAAC CTATACCCTT
TTGCTGGCCG TTGTTGTTAC CTTAAGCCTG GTTGTCGGCA ATTTATCGGC ACTCATGCAG
GACAATACCC GGCGCTTAAT GGCTTATTCC TCGATTGCAC AAAGTGGCTT TATCGGCATG
GCAATCATAG GAGGAGGCGA TTTGAGCCAG CAATCCACGT TTTTTTACTT AGTTGTCTAT
CTATTCAGTG TGCCGGCGGC TTTGGCAATT TTGGATTATT TTGAGAACCT GACCGCCGGA
GATGCTGTGA ATAACTTTAA TGGATTAGGC AAGCAGGAAC CTGTAATGAG TATTATCTTT
GTTATAGTGA TGGCAACGCT CATTGGCTTA CCTCCAACAG GTGGTTTCTT TGCAAAATTA
TTTGTCTTTA CGACAGTTTG GGAGCAATAT GAAACCATTC AGTCCCCAAT ACTGTTAGGG
GTGGTAGGTG CAGCAGTTGT CGGTACCATA GCTTCTGTAT TTTATTATAT GAAGGTTCCT
TACGCTTTGT TTTTCAAGGG GTTTGAAAAC ACGATAATAC TTACATCCAA ACACAAAAGT
TCTCTTCTTT TCGTAAGTTT AATTATGCTT CCTGTGCTTG GGTTATTCTT CGCACCGAGT
TGGTTGATGG ATTTACTAAA ATTAATTGTT GGCAACATTT AA
 
Protein sequence
MHIPIEEIRQ SLTYLIPEAW LLLGLLIVLC LDMFAGTRKN IYFTTITLVV LGVSTCYLLG 
ALIDRDSLPP RTFMNEMLEQ NTAILFSKIL LGISGMIGVV FIQISPSSQW LRERGETYIL
LLAILMGSYF LVASINLFMV FLSLELISIP SYLLVASRFD KKSTEAGIKY LLYGAFATGV
MLFGISLLYG LTAGMDLFSD RWIRVFAEVP VFSKWIVLGL VLAALFFKTS LFPFHPWTPD
TYEGSGWGVL NILSTVPKIA AFVFLLKLSA LFQGFQTYTL LLAVVVTLSL VVGNLSALMQ
DNTRRLMAYS SIAQSGFIGM AIIGGGDLSQ QSTFFYLVVY LFSVPAALAI LDYFENLTAG
DAVNNFNGLG KQEPVMSIIF VIVMATLIGL PPTGGFFAKL FVFTTVWEQY ETIQSPILLG
VVGAAVVGTI ASVFYYMKVP YALFFKGFEN TIILTSKHKS SLLFVSLIML PVLGLFFAPS
WLMDLLKLIV GNI