Gene CHU_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2540 
Symbol 
ID4186819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2923617 
End bp2924252 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content36% 
IMG OID638072532 
Productcyclic nucleotide binding regulatory protein 
Protein accessionYP_679135 
Protein GI110638926 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.90473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTTAT ACTCAAAAGA ATTCATCTTT GGATTACAAC TTAACCCGAA AATGAATACC 
GAAGAGCTAA TAAAACAAGC ATTTGATCCT TACTTCAATG TTCCTCTTGA AGCGTGGCAA
TCATTTACGG ACTTAGGAGA AGTTATAGCA ACCACTAAAG ACCAAATCAT AAAAAATCCG
GACACAACAG AAAAGTACCT GAGTTTTATT CTAAAAGGAA GTGGCGGAAT CTTATTTTGG
AATAATGCTA ATTTTGTGTG TATTGACCTT TGCTACGAAG GAGAATTTTT TGGTGATTAT
ATGTCCTTTC TTAACCAACG ACCAACACCG CTTGAAGTGA TAACTTTTGA ACCCTCCGAA
CTTTTCAGAA TATCTAAAAC CAATTTTGAC AAGCTAAGCA GCAATACAGA ATTTGGAGAT
AAAATCTGCC GGTTTGCATC CGAAGGACTT TTCATTCACA AACAAAAGCA GCAAATAGAT
ATACTGTCAA AAACGGCAAC AGAAAGATAC ATTGAATTGC AGGCCGAACA ACCAACTATT
ATTCAGCGAA CACCTCAAAA ATACATTGCA TCTTATCTCG GAATAACGCC TCAAAGTTTG
AGTAGAATAA GAAACGAGTG TGCACTTAAG CATTAG
 
Protein sequence
MFLYSKEFIF GLQLNPKMNT EELIKQAFDP YFNVPLEAWQ SFTDLGEVIA TTKDQIIKNP 
DTTEKYLSFI LKGSGGILFW NNANFVCIDL CYEGEFFGDY MSFLNQRPTP LEVITFEPSE
LFRISKTNFD KLSSNTEFGD KICRFASEGL FIHKQKQQID ILSKTATERY IELQAEQPTI
IQRTPQKYIA SYLGITPQSL SRIRNECALK H