| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2527 |
|---|
| Symbol | pdhC |
|---|
| ID | 4187052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2906162 |
|---|
| End bp | 2907544 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072520 |
|---|
| Product | dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_679123 |
|---|
| Protein GI | 110638914 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTGG TTGAATTGGT AATGCCCAAA ATGGGAGAAA GCGTAATGGA AGGAACGATT
TTAAACTGGT TGAAAAAACC GGGAGATCGT ATCCAACAAG ATGAATCTGT TTTGGAAGTA
GCTACAGACA AAGTAGACAC AGAAGTGCCT TCTCCATTTA ACGGAATTTT AAAAGAAATA
AAAGCGAATC AGGGTGATGT TGTTCAGGTA GGAACAGCGA TAGCTCTTAT TGAAACCGAC
GTCAATCAGG CGGCAAATAG TGAGCCTGCA ACCACTGCTC CTGCGGCAAA TACAAATTCT
GGTACGGCAA CTACACAAAC AGTACAACAG ACAGCTGTGG CTGAAAAAAT ACCTGTCTCC
ACTCCTCAGA CTCATATCCC CGCTCATACA GCTGGTGCCA AAGGCGGAAG ATTCTATTCG
CCATTGGTTT TAAATATTGC TCGCCAGGAA AATATATCTT TGGCGGAAGT TGAAACCATT
GCCGGTACAG GCAAAGACGG ACGTGTTACA AAAAATGATC TGTTCGATTA CCTGCAGGCT
AAAAAAGAAG GTAAGGTAAC GGCTGTTACT CAGGAAACTG TTGTTAACGA AACACCACAG
GCAACGGAAC AAAAAGCACC AGTTGCTGAA CCTGTTTATG TGAACAAACC TGCTTCTTCT
CAAAGCGGTA ATGTAGAAAT CATACAAATG GATCGCATGC GTAAGATGAT TGCAGACCGC
ATGGTTGAAT CAAAACGCAT TTCTCCGCAC GTTACATCTT TTGTTGAAGC AGATGTAACC
AATATTGTAT ACTGGAGAAA CCGCTGGAAA AATGATTTCA TGGAACGTGA AAATGTTGCC
TTAACATTTA CACCTATTTT CATTGAAGCC GTTGTTAAAG CAATAAAAGA TTACCCGATG
GTTAACATCT CTATTGAAGA CGATAAAATC ATTGTAAAAA AAGATATCAA TATCGGTATA
GCGGTTGCAC TTCCGAATGG TAATTTAATT GTTCCTGTAA TTAAAAATGC AGATCAGTTA
AACATTGTAG GACTTACTAA AAAAGTAAAT GACCTGGCAA AGCGTGCCCG TCAGAATAAA
CTTACAGCGG ATGATCTTTC CGGAGGAACC TATACCGTTT CAAATGTCGG CTCTTTCGGT
AATTTAATGG GAACGCCTAT CATTGTTCAG CCTCAGGCAG CCATTCTTGC GTTGGGTGCT
GTGGTTAAAA AACCTGCTGT TATTGAAACA CCACAAGGCG ATACACTTGG TATCCGCCAT
ATGATGTTCT TATCACACTC TTACGATCAT CGCGCAATTG ATGGTTCACT AGGCGGTATG
TTTGTTCGCA GAGTGGCTGA TTTCTTAGAA AACTTTGATG TAAACAGAAA AATATTTGTC
TAA
|
|---|
| Protein sequence | MALVELVMPK MGESVMEGTI LNWLKKPGDR IQQDESVLEV ATDKVDTEVP SPFNGILKEI
KANQGDVVQV GTAIALIETD VNQAANSEPA TTAPAANTNS GTATTQTVQQ TAVAEKIPVS
TPQTHIPAHT AGAKGGRFYS PLVLNIARQE NISLAEVETI AGTGKDGRVT KNDLFDYLQA
KKEGKVTAVT QETVVNETPQ ATEQKAPVAE PVYVNKPASS QSGNVEIIQM DRMRKMIADR
MVESKRISPH VTSFVEADVT NIVYWRNRWK NDFMERENVA LTFTPIFIEA VVKAIKDYPM
VNISIEDDKI IVKKDINIGI AVALPNGNLI VPVIKNADQL NIVGLTKKVN DLAKRARQNK
LTADDLSGGT YTVSNVGSFG NLMGTPIIVQ PQAAILALGA VVKKPAVIET PQGDTLGIRH
MMFLSHSYDH RAIDGSLGGM FVRRVADFLE NFDVNRKIFV
|
|---|
| |