Gene CHU_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2496 
Symbol 
ID4185636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2872390 
End bp2872797 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content44% 
IMG OID638072489 
Productendoribonuclease, inhibits protein synthesis 
Protein accessionYP_679092 
Protein GI110638883 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.591272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.661186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC AGCTAAAACA TCTGAATCCG GAAGGACTAT TCAAAAGCCC GGCATTTTCT 
CAGGTTGTAA CTACAGAGGG AAGCGGCAAA ACGATTTATA TCGGCGGCCA AAATGCAGTT
AACAGTAAAG CCGAACTGGT AGGTAAAGGC GATCTTTCGT TGCAAACCGA GCAGGTAATG
AAGAATATTG AAATAGCGCT GCAGGCTGCC GGCGCTACTT TCAGCGATTT AGTAAAACTG
AATATTAATC TTGTACATGG GCAGGATGCC ATGCAAGGGT TTGCAGCGGC ACAAAAATTT
TTAAGTAATG CATCCAAGCC ACCCGCAGTA ACGGTATTAT TTGTAGCAGC CCTGGGGCAA
CCTGATTATC TGCTGGAAAT AGAAGCTATT GCATTTGTCG GAAAGTAA
 
Protein sequence
MENQLKHLNP EGLFKSPAFS QVVTTEGSGK TIYIGGQNAV NSKAELVGKG DLSLQTEQVM 
KNIEIALQAA GATFSDLVKL NINLVHGQDA MQGFAAAQKF LSNASKPPAV TVLFVAALGQ
PDYLLEIEAI AFVGK