Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2439 |
Symbol | pntA |
ID | 4186567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2803834 |
End bp | 2804982 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638072433 |
Product | pyridine nucleotide transhydrogenase, alpha subunit |
Protein accession | YP_679036 |
Protein GI | 110638827 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0686] Alanine dehydrogenase |
TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGC GCAAGCAACA TCCACAGCTG TGTATCGGCA TACCTAAAGA GTTAGAAGGC ATTGAAAACA GAGTATGTTT AACCCCTGAA GCGGTAGCGT TGATTGTAAA CAACGGGCAT ATTGTTCAGG TAGAAACAGG TGCAGGTTTG AACGCGAAAT TTTCAGACCG GGAATACAGT GAAGCCGGTG CGAAAATTGT GTATTCGAAA AAAGAAGTTT TTGATTCGGA AATTGTGTTG AAAGTAGATC CGCCAACAAC AGAAGAAATC GGTTATATGA AACCGGGCAA GACCCTGATC TCAGCCCTTC AGATGTCTAC GCTTGATCCG GGTTATATTA CAGAGATTAA TAAAAAACGT ATCACCGGCC TTGCCTATGA ATTTATTGAA GACAAGGCAG GGGGAAAGCC GGTTGTAAAA TCCATGAGTG AAATTGCCGG AAGCGCTGTT ATGCAGATTG CTGCCGAATA CCTGATCTCT AAAAACGGTA TGGGGGTAAT ATTAGGTGGC GTAACCGGTG TGCCTTCAAC AAAAGTACTG ATCTTAGGTG CCGGAACAGT GGCCGAATAC GCTGCCCGTA CGGCTATTGG ATTGGGTGCG GAGGTAAAAG TATTCGACAG TCATTTATAT CGCTTACGAC GCATAAAATT AAACCTGGGT ATGCAATTGT ATACCTCAGT AATTGATACG GTAAATCTAC GGAAAGAATT ACGCGAGGCC GATGTTGTAA TCGGTTCGCT GCGTGCCGAA GAAGGTACGT CATGTCTGGT AACAGATGAA ATGGTAACAG AAATGAAACC TAACTCGATT GTGGTGGATG TAAGTATTGA TCAGGGAGGA TGTTTTGAAA CGTCTCAGAT CACGAATCAC ATCAGTCCTA TTTACAGAAA GTATGATGTG ATCCATTATT GTGTGCCGAA TATACCGTCG CGCGTGGCGC GTACTGCTAC TATTTCACTA AGTAATATTT TTGCACCGAT CCTGTTACAG ATTGCAGAAG CTGGCGGAGT CGAAGAGATG ATTCACCACA AAGAATGGTT TATGAACGGC ATCTACAGCT ATAAAGGATA TTTAACGAAT TCAATTATGG CTAAAAAATA CAACGAATCT TATAAGGATA TAAAGCTGTT AACGGCGAGT ATGTTTTAG
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Protein sequence | MKVRKQHPQL CIGIPKELEG IENRVCLTPE AVALIVNNGH IVQVETGAGL NAKFSDREYS EAGAKIVYSK KEVFDSEIVL KVDPPTTEEI GYMKPGKTLI SALQMSTLDP GYITEINKKR ITGLAYEFIE DKAGGKPVVK SMSEIAGSAV MQIAAEYLIS KNGMGVILGG VTGVPSTKVL ILGAGTVAEY AARTAIGLGA EVKVFDSHLY RLRRIKLNLG MQLYTSVIDT VNLRKELREA DVVIGSLRAE EGTSCLVTDE MVTEMKPNSI VVDVSIDQGG CFETSQITNH ISPIYRKYDV IHYCVPNIPS RVARTATISL SNIFAPILLQ IAEAGGVEEM IHHKEWFMNG IYSYKGYLTN SIMAKKYNES YKDIKLLTAS MF
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