Gene CHU_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2439 
SymbolpntA 
ID4186567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2803834 
End bp2804982 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content42% 
IMG OID638072433 
Productpyridine nucleotide transhydrogenase, alpha subunit 
Protein accessionYP_679036 
Protein GI110638827 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC GCAAGCAACA TCCACAGCTG TGTATCGGCA TACCTAAAGA GTTAGAAGGC 
ATTGAAAACA GAGTATGTTT AACCCCTGAA GCGGTAGCGT TGATTGTAAA CAACGGGCAT
ATTGTTCAGG TAGAAACAGG TGCAGGTTTG AACGCGAAAT TTTCAGACCG GGAATACAGT
GAAGCCGGTG CGAAAATTGT GTATTCGAAA AAAGAAGTTT TTGATTCGGA AATTGTGTTG
AAAGTAGATC CGCCAACAAC AGAAGAAATC GGTTATATGA AACCGGGCAA GACCCTGATC
TCAGCCCTTC AGATGTCTAC GCTTGATCCG GGTTATATTA CAGAGATTAA TAAAAAACGT
ATCACCGGCC TTGCCTATGA ATTTATTGAA GACAAGGCAG GGGGAAAGCC GGTTGTAAAA
TCCATGAGTG AAATTGCCGG AAGCGCTGTT ATGCAGATTG CTGCCGAATA CCTGATCTCT
AAAAACGGTA TGGGGGTAAT ATTAGGTGGC GTAACCGGTG TGCCTTCAAC AAAAGTACTG
ATCTTAGGTG CCGGAACAGT GGCCGAATAC GCTGCCCGTA CGGCTATTGG ATTGGGTGCG
GAGGTAAAAG TATTCGACAG TCATTTATAT CGCTTACGAC GCATAAAATT AAACCTGGGT
ATGCAATTGT ATACCTCAGT AATTGATACG GTAAATCTAC GGAAAGAATT ACGCGAGGCC
GATGTTGTAA TCGGTTCGCT GCGTGCCGAA GAAGGTACGT CATGTCTGGT AACAGATGAA
ATGGTAACAG AAATGAAACC TAACTCGATT GTGGTGGATG TAAGTATTGA TCAGGGAGGA
TGTTTTGAAA CGTCTCAGAT CACGAATCAC ATCAGTCCTA TTTACAGAAA GTATGATGTG
ATCCATTATT GTGTGCCGAA TATACCGTCG CGCGTGGCGC GTACTGCTAC TATTTCACTA
AGTAATATTT TTGCACCGAT CCTGTTACAG ATTGCAGAAG CTGGCGGAGT CGAAGAGATG
ATTCACCACA AAGAATGGTT TATGAACGGC ATCTACAGCT ATAAAGGATA TTTAACGAAT
TCAATTATGG CTAAAAAATA CAACGAATCT TATAAGGATA TAAAGCTGTT AACGGCGAGT
ATGTTTTAG
 
Protein sequence
MKVRKQHPQL CIGIPKELEG IENRVCLTPE AVALIVNNGH IVQVETGAGL NAKFSDREYS 
EAGAKIVYSK KEVFDSEIVL KVDPPTTEEI GYMKPGKTLI SALQMSTLDP GYITEINKKR
ITGLAYEFIE DKAGGKPVVK SMSEIAGSAV MQIAAEYLIS KNGMGVILGG VTGVPSTKVL
ILGAGTVAEY AARTAIGLGA EVKVFDSHLY RLRRIKLNLG MQLYTSVIDT VNLRKELREA
DVVIGSLRAE EGTSCLVTDE MVTEMKPNSI VVDVSIDQGG CFETSQITNH ISPIYRKYDV
IHYCVPNIPS RVARTATISL SNIFAPILLQ IAEAGGVEEM IHHKEWFMNG IYSYKGYLTN
SIMAKKYNES YKDIKLLTAS MF