Gene CHU_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2417 
Symbol 
ID4183652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2779024 
End bp2780904 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content44% 
IMG OID638072412 
Productglutamine-dependent NAD(+) synthetase 
Protein accessionYP_679015 
Protein GI110638806 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.906393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA TACGGATAGG CGGCGCGGCA GTAAATCAAA CTCCCATTGA CTGGGAAAAT 
AATGTTAAAA ATATTCTTGA TGCAATAGAG GAAGCAAAAA ATGCGAATGT AGAAATTCTT
TGCTTACCTG AATTATGTAT CACCGGATAT GGCTGCGAAG ATTTATTTTT AACGGATTGG
GTTGCCGAAA CAGCTATTGA ATATTGTTTT GAAATAGCTG CATCGTGTAC AGACATTACG
GTTTCCTTAG GTTTACCGAT GCGCATTGCA GGTATTACGT ACAACTGTGT CTGCCTGGTT
GAAAATGGGA TAGTAAAAGG CTTTTCTGCC AAACAGTTTT TAGCAAACGA AGGTGTACAT
TATGAAACGC GTTGGTTCAC TGCCTGGCCT CGAAACCACA CTACTACCTT TCTCTACAAC
GATGTAAAAT ACCCATTCGG TGATGTCTTG TATAATGTAA AAGATGCCCG TATCGGATTT
GAAATATGTG AAGATGCCTG GCGCACAGAC CGTGTAGGTA TCCGCCATTA TGAAAAAGGC
GCTACACTGG TATTAAACCC TAGTGCCAGC CATTTTGCAT TTGGAAAATC TGCCATCCGC
TACGACCTGG TAATTGGCGG GTCTGAACGG TTTGATTGTA CCTATGTGTA TGCCAACCTG
CTCGGAAACG AAGCCGGACG CATGATCTAC GACGGCGAAG TACTCATTGC ACATAAAGGC
AAACTCATTC AGCGCAACGA TCGCCTTTCG TTTAAGAATG TAAACCTCAT CTACGCGGAT
ATTGCTACCG ATTCAGCTGA AACGCCTGAA ACCGTGCTTA CGCAGGACGA TCTGGAAAAA
GAATTTGAAT TCTGGGAAGC TACTTCTCTG GGGCTTTTTG ATTACATGCG CAAAAGCCGC
AGCAAAGGAT TTGTTTTATC GCTCAGCGGC GGTGCTGATT CTTCCGCCTG TGCTATTATG
GTTGCCGAAA TGATCCGTAA AGGATTAAAA GAATTAGGAC TAACGGCATT CCTCCAAAAA
TCAAACATGG AAACACTGTT TGATCTTCCG GCGTTACAAC ATCTTCCTTT TGAAGAACAG
GCAAAAAAAA TAACCGCTGT ATTTTTAACA ACGGCATACC AATCTACACG CAACTCCGGA
GATGAAACCT ATACGTCTGC TAAAACACTG GCAGAATCTA TCGGTGCAAC ATTTTACAAC
TGGAGTGTGG ACGAAGAGAT TGAACAGTAT AAGGCTACTA TAGAAAACGT AATTGAACGC
CCGCTTACCT GGGAAAAAGA TGATATTACC CTGCAGAACA TTCAGGCGCG CGGCAGAGCA
CCGATCATCT GGATGCTCAC AAATGTGAAG CAGGCCTTGC TGATTACAAC TTCGAACAGA
AGCGAAGGTG ATGTAGGGTA TGCAACCATG GATGGTGATA CAGCGGGCGG GATCGCTCCT
ATTGCCGGTG TAGATAAGGA TTTCATCCGA AGCTGGCTGC GCTGGGCAGA AAAAAACAGA
AATCAGCATG GATTGCATAT TGTAAATAAA CTGGCACCAA CCGCAGAACT ACGCCCGTCA
GAATATACAC AGACAGACGA ACGGGATCTC ATGCCATATG ATGTCCTGGC CCGTATTGAA
CGTAAAGCAA TTAAAGAACG GCTTTCACCT GTTCAGGTGT ATACTGCATT ACTTACTGAA
GGCCCGTATA CCAAAAACGA ATTTAAATAC TGGGTAAAGA AATTTTTCCG TTTGTGGTCA
ATCAATCAAT GGAAACGCGA ACGCCTTGCA CCTTCTTTTC ACATGGATGA TTTTAATATT
GATCCAAGAT CCTGGTATCG TTTCCCGATT CTGAGCAGTG GTTTTGCAAA AGAACTGAAC
GATCTGGATC AGTTACAATA A
 
Protein sequence
MSTIRIGGAA VNQTPIDWEN NVKNILDAIE EAKNANVEIL CLPELCITGY GCEDLFLTDW 
VAETAIEYCF EIAASCTDIT VSLGLPMRIA GITYNCVCLV ENGIVKGFSA KQFLANEGVH
YETRWFTAWP RNHTTTFLYN DVKYPFGDVL YNVKDARIGF EICEDAWRTD RVGIRHYEKG
ATLVLNPSAS HFAFGKSAIR YDLVIGGSER FDCTYVYANL LGNEAGRMIY DGEVLIAHKG
KLIQRNDRLS FKNVNLIYAD IATDSAETPE TVLTQDDLEK EFEFWEATSL GLFDYMRKSR
SKGFVLSLSG GADSSACAIM VAEMIRKGLK ELGLTAFLQK SNMETLFDLP ALQHLPFEEQ
AKKITAVFLT TAYQSTRNSG DETYTSAKTL AESIGATFYN WSVDEEIEQY KATIENVIER
PLTWEKDDIT LQNIQARGRA PIIWMLTNVK QALLITTSNR SEGDVGYATM DGDTAGGIAP
IAGVDKDFIR SWLRWAEKNR NQHGLHIVNK LAPTAELRPS EYTQTDERDL MPYDVLARIE
RKAIKERLSP VQVYTALLTE GPYTKNEFKY WVKKFFRLWS INQWKRERLA PSFHMDDFNI
DPRSWYRFPI LSSGFAKELN DLDQLQ