Gene CHU_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2416 
Symbol 
ID4183651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2777720 
End bp2778760 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content43% 
IMG OID638072411 
Productmultiple sugar-binding ABC transporter, ATP-binding protein 
Protein accessionYP_679014 
Protein GI110638805 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.860941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCAG TTAAAAATTT GAGCATGCGT TATCAGGAGG CTACTTTTGA TGCGGTGCAG 
GATATTTCCT TTGAACTTGA ACGGGGAAAG AAGTTAGCGA TTGTTGGAGA AAGCGGCAGC
GGAAAAACTA CTTTATTAAA ATTGCTTGCC GGGTTGTTTG ATCCGAACGC CGGCGATATT
CATTTAAATG ACAGTCGCGT TCTGGGACCC GCACACAATC TGGTAGCGGG GCATCCGCAC
ATACGTATTG TTCTGCAGGA TTATGGCCTG AAGAAAAATC AATCTCTGAA AGAAAACCTG
CAGCATCCGC TGCGGTATTT TACAGCAGAA GAACAGAATG AAAAAATCGC CGTGCTTGCA
AAGATCTTTC ATATACAGCA GTTGCTTGAT CGTAAATCGT ATCAGTTGTC TGGCGGGCAG
CAGCAGCGTG CAGCCATTGC AGCTGCTTTT GCAGCTTCAC CGCAGGTAAT GCTTATGGAT
GAACCGTTCA GTAACCTGGA TGTGTTACTG GCCGATCATA TCCGCATGTT TATGATGAAG
GAGATCCGTA AAACAAAAAC CAGCCTGATT TTTGTAACAC ACCAGACAAC CGATGCGCTG
GCACTTGCGG ATACCATTCT GGTAATGCGC AACGGAAAAA TGGTACAGAT GGGAACAGTT
GAAGAGATCT ACGATCAGCC GGTTTCTCCG TATGTAGCAG CGTTGTTTTC GGACATTAAT
TTTTTCCGTT TTTCAAAACT GGAAGATTTA AAATTGAAAG GTTATAAGCC GTGTGAGAAA
GAACTGGGAA ATAATTTTAT CGCCGCCATC CGTTCTCATG ATATAGAAGT GCTCACTAAA
GGAAAAGGCC TGAGCAAAGC AGTGGTGCTT CGTAAAGAGT TTCATGGTGA TCAGTATAAA
TTATTTTTGC GTTTACCGAA TAAGCTGCAA TTGAAAGCAT TTACCACAGA CATTTCCATA
CAGGAAGGCG ATGTAGTAAA ATTAAATTTC ACCTTTGAAG ATCTGTTGTT GTTCCCGAAT
CAAACAACAC TGGACGTTTA G
 
Protein sequence
MLSVKNLSMR YQEATFDAVQ DISFELERGK KLAIVGESGS GKTTLLKLLA GLFDPNAGDI 
HLNDSRVLGP AHNLVAGHPH IRIVLQDYGL KKNQSLKENL QHPLRYFTAE EQNEKIAVLA
KIFHIQQLLD RKSYQLSGGQ QQRAAIAAAF AASPQVMLMD EPFSNLDVLL ADHIRMFMMK
EIRKTKTSLI FVTHQTTDAL ALADTILVMR NGKMVQMGTV EEIYDQPVSP YVAALFSDIN
FFRFSKLEDL KLKGYKPCEK ELGNNFIAAI RSHDIEVLTK GKGLSKAVVL RKEFHGDQYK
LFLRLPNKLQ LKAFTTDISI QEGDVVKLNF TFEDLLLFPN QTTLDV