Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2416 |
Symbol | |
ID | 4183651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2777720 |
End bp | 2778760 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638072411 |
Product | multiple sugar-binding ABC transporter, ATP-binding protein |
Protein accession | YP_679014 |
Protein GI | 110638805 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.860941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATCAG TTAAAAATTT GAGCATGCGT TATCAGGAGG CTACTTTTGA TGCGGTGCAG GATATTTCCT TTGAACTTGA ACGGGGAAAG AAGTTAGCGA TTGTTGGAGA AAGCGGCAGC GGAAAAACTA CTTTATTAAA ATTGCTTGCC GGGTTGTTTG ATCCGAACGC CGGCGATATT CATTTAAATG ACAGTCGCGT TCTGGGACCC GCACACAATC TGGTAGCGGG GCATCCGCAC ATACGTATTG TTCTGCAGGA TTATGGCCTG AAGAAAAATC AATCTCTGAA AGAAAACCTG CAGCATCCGC TGCGGTATTT TACAGCAGAA GAACAGAATG AAAAAATCGC CGTGCTTGCA AAGATCTTTC ATATACAGCA GTTGCTTGAT CGTAAATCGT ATCAGTTGTC TGGCGGGCAG CAGCAGCGTG CAGCCATTGC AGCTGCTTTT GCAGCTTCAC CGCAGGTAAT GCTTATGGAT GAACCGTTCA GTAACCTGGA TGTGTTACTG GCCGATCATA TCCGCATGTT TATGATGAAG GAGATCCGTA AAACAAAAAC CAGCCTGATT TTTGTAACAC ACCAGACAAC CGATGCGCTG GCACTTGCGG ATACCATTCT GGTAATGCGC AACGGAAAAA TGGTACAGAT GGGAACAGTT GAAGAGATCT ACGATCAGCC GGTTTCTCCG TATGTAGCAG CGTTGTTTTC GGACATTAAT TTTTTCCGTT TTTCAAAACT GGAAGATTTA AAATTGAAAG GTTATAAGCC GTGTGAGAAA GAACTGGGAA ATAATTTTAT CGCCGCCATC CGTTCTCATG ATATAGAAGT GCTCACTAAA GGAAAAGGCC TGAGCAAAGC AGTGGTGCTT CGTAAAGAGT TTCATGGTGA TCAGTATAAA TTATTTTTGC GTTTACCGAA TAAGCTGCAA TTGAAAGCAT TTACCACAGA CATTTCCATA CAGGAAGGCG ATGTAGTAAA ATTAAATTTC ACCTTTGAAG ATCTGTTGTT GTTCCCGAAT CAAACAACAC TGGACGTTTA G
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Protein sequence | MLSVKNLSMR YQEATFDAVQ DISFELERGK KLAIVGESGS GKTTLLKLLA GLFDPNAGDI HLNDSRVLGP AHNLVAGHPH IRIVLQDYGL KKNQSLKENL QHPLRYFTAE EQNEKIAVLA KIFHIQQLLD RKSYQLSGGQ QQRAAIAAAF AASPQVMLMD EPFSNLDVLL ADHIRMFMMK EIRKTKTSLI FVTHQTTDAL ALADTILVMR NGKMVQMGTV EEIYDQPVSP YVAALFSDIN FFRFSKLEDL KLKGYKPCEK ELGNNFIAAI RSHDIEVLTK GKGLSKAVVL RKEFHGDQYK LFLRLPNKLQ LKAFTTDISI QEGDVVKLNF TFEDLLLFPN QTTLDV
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