Gene CHU_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2411 
SymbolgalE 
ID4183841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2773447 
End bp2774448 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content42% 
IMG OID638072406 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_679009 
Protein GI110638800 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.016358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAG TTTTAGTTAC AGGTGGTGCA GGATATATCG GTTCGCATGC TGTGCGTGCA 
TTAGCCAATT TAAATTATCA GGTTATTGTG CTGGATAATC TTATTTACGG ACATAGAGAA
GCCATCGTAA ACAGTGAAGT ACGTTTTGTT GAAGGGGACA TTGCCAATAA AGCCTTGGTT
ATTGATATTC TTAAAACATA TAAGGTAGAT GCAGTCATGC ACTTTGCTGC ATTTGCTTAT
GTGGGTGAGT CTGTAACAGA GCCGACAAAA TATTACAACA ATAACTTAGC TGCTTCCATT
ACCCTGCTTG ATGCTATGCG TGAAGCAGGC TGTAAAAATA TTATTTTTTC TTCTACCTGC
GCTTCTTATG GTTCGCCTAA ATACATGCCT ATTGATGAGG CTCATCCGCA AGAACCCATT
AATCCATATG GCGCGAGCAA GTGGATGCTT GAGCGTGTAA TCAAAGATTA CCACCATGCT
TACGGGATCA ATTATGCCTT CTTACGGTAT TTTAATGCAT CTGGCTGTTC GGCAGATGGT
TTGATCGGCG AAGATCACGA TCCGGAACCG CATTTAATTC CATTGATCTT AAAAGCGATC
AAAGGGGAAC GCGATGCGAT TACTGTATTT GGTACAGATT ATGAAACACC GGATGGTACC
TGTGTACGTG ACTATATTCA CGTTGAAGAC CTTGCAGATG CACACATTAA AGCGTTTACT
TATCTATTGT CTGGTAAAGG TCCGGTTATC TGTAATTTAG GTACGGGAGT TGGTTATTCA
GTTAAAGAGA TGATCGATGC AGCGGAGCGG GCTACAGGTA AAAAGGTACC GGTAAAATAT
GGTGAACGCA GAGCAGGTGA TCCAAGTCAT CTGGTTGCGA ATGCTGAAAA AGCCTGGAAA
GAACTGGGCT GGAAAGCACG TTACGTAAAT ATTGAAGAAA TCATCGCAAC GGCCTGGAAA
TGGGAGAATG GCGAACGTAG CGGCCGTTAT GGAAAAAATT AA
 
Protein sequence
MSTVLVTGGA GYIGSHAVRA LANLNYQVIV LDNLIYGHRE AIVNSEVRFV EGDIANKALV 
IDILKTYKVD AVMHFAAFAY VGESVTEPTK YYNNNLAASI TLLDAMREAG CKNIIFSSTC
ASYGSPKYMP IDEAHPQEPI NPYGASKWML ERVIKDYHHA YGINYAFLRY FNASGCSADG
LIGEDHDPEP HLIPLILKAI KGERDAITVF GTDYETPDGT CVRDYIHVED LADAHIKAFT
YLLSGKGPVI CNLGTGVGYS VKEMIDAAER ATGKKVPVKY GERRAGDPSH LVANAEKAWK
ELGWKARYVN IEEIIATAWK WENGERSGRY GKN