Gene CHU_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2184 
Symbol 
ID4183933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2537485 
End bp2538459 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content38% 
IMG OID638072184 
Producthypothetical protein 
Protein accessionYP_678788 
Protein GI110638580 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.355091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTA ACGAACCTTT TGTGAAAAAA ATCAATCCTT CCGGAATCTT TTCTGCAGGT 
ATAAAAATTG CCGTTTTCCT TTTTTCAATA GGTGTTATTT ATACTGTGTT GCTGGAGAAA
AAGCATTGGC TTGAACTGTT TGCACAAACA TTTTTTAAAG AAAACGGACT ATATGTTTTT
GCAGCCATGC TTGCAGCCAT GTTTGCTAAT ATTTCGGTAG AAGCAATTAA GTGGAAACGG
CTGGTAAAAT CCATTACTGT AATACCTTTT TCAACGTCTT TAATGGCGGT GTATAGCGGT
ATTGTAGCGG GTATAATCAC ACCGCATGGC ATTGGGGATT ATGTTGGAAG AGTATTATTT
ATACATTCTG AAAAACGGTT TGAAAGTATC GGGTCTGTAT TATTCAGCCG GGTGGCACAA
CTGTGCATTA CCTGTATTAC CGGCGTTGCG GCAGTGATCT ATTTTTATTT TTTTATAGAA
GAAGATGCAC ATATGTTACT TGCATTGGCT GTTGCATGTG TCACCTTGGT ATTGATTTGT
GTGGCATGGA ACTATCGTGC CTGGCTGCTC GATAAAATGA AGCATGTTCC GTTATTAAAA
AATATCGAAA AATGGTTTGA ACAGCTGCGC ATGTATAATA ATCTGCTGTT TGCAGAAACA
CTGGGCTTGT CAGCGTTTCG GTATCTTATT TTCCTATCTC AGTTTGTTTG CCTGCTGATG
TATTTTGGTG TTGATCTGCC CATTGAAATT CTTATAACAG GATCGGTATT TACATTTTTT
GTCAAGTCTG TGATCCCATC TTTTCTGGAT ATTGGGGTGC GGGAGCTTGC TGCCGTTTTT
TTCTTTTCTG CCTATCATAT TGCAGATGAA AAAGTATTGC TGGCAAGTTT AAGTCTGTGG
TTTTTTAATC TGCTGATTCC TGCGGTTATA GGTTTGTTCT GTATGTTTAA AATAGAATAT
AGAAAACGGA CGTAG
 
Protein sequence
MQVNEPFVKK INPSGIFSAG IKIAVFLFSI GVIYTVLLEK KHWLELFAQT FFKENGLYVF 
AAMLAAMFAN ISVEAIKWKR LVKSITVIPF STSLMAVYSG IVAGIITPHG IGDYVGRVLF
IHSEKRFESI GSVLFSRVAQ LCITCITGVA AVIYFYFFIE EDAHMLLALA VACVTLVLIC
VAWNYRAWLL DKMKHVPLLK NIEKWFEQLR MYNNLLFAET LGLSAFRYLI FLSQFVCLLM
YFGVDLPIEI LITGSVFTFF VKSVIPSFLD IGVRELAAVF FFSAYHIADE KVLLASLSLW
FFNLLIPAVI GLFCMFKIEY RKRT