Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2184 |
Symbol | |
ID | 4183933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2537485 |
End bp | 2538459 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638072184 |
Product | hypothetical protein |
Protein accession | YP_678788 |
Protein GI | 110638580 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.355091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTA ACGAACCTTT TGTGAAAAAA ATCAATCCTT CCGGAATCTT TTCTGCAGGT ATAAAAATTG CCGTTTTCCT TTTTTCAATA GGTGTTATTT ATACTGTGTT GCTGGAGAAA AAGCATTGGC TTGAACTGTT TGCACAAACA TTTTTTAAAG AAAACGGACT ATATGTTTTT GCAGCCATGC TTGCAGCCAT GTTTGCTAAT ATTTCGGTAG AAGCAATTAA GTGGAAACGG CTGGTAAAAT CCATTACTGT AATACCTTTT TCAACGTCTT TAATGGCGGT GTATAGCGGT ATTGTAGCGG GTATAATCAC ACCGCATGGC ATTGGGGATT ATGTTGGAAG AGTATTATTT ATACATTCTG AAAAACGGTT TGAAAGTATC GGGTCTGTAT TATTCAGCCG GGTGGCACAA CTGTGCATTA CCTGTATTAC CGGCGTTGCG GCAGTGATCT ATTTTTATTT TTTTATAGAA GAAGATGCAC ATATGTTACT TGCATTGGCT GTTGCATGTG TCACCTTGGT ATTGATTTGT GTGGCATGGA ACTATCGTGC CTGGCTGCTC GATAAAATGA AGCATGTTCC GTTATTAAAA AATATCGAAA AATGGTTTGA ACAGCTGCGC ATGTATAATA ATCTGCTGTT TGCAGAAACA CTGGGCTTGT CAGCGTTTCG GTATCTTATT TTCCTATCTC AGTTTGTTTG CCTGCTGATG TATTTTGGTG TTGATCTGCC CATTGAAATT CTTATAACAG GATCGGTATT TACATTTTTT GTCAAGTCTG TGATCCCATC TTTTCTGGAT ATTGGGGTGC GGGAGCTTGC TGCCGTTTTT TTCTTTTCTG CCTATCATAT TGCAGATGAA AAAGTATTGC TGGCAAGTTT AAGTCTGTGG TTTTTTAATC TGCTGATTCC TGCGGTTATA GGTTTGTTCT GTATGTTTAA AATAGAATAT AGAAAACGGA CGTAG
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Protein sequence | MQVNEPFVKK INPSGIFSAG IKIAVFLFSI GVIYTVLLEK KHWLELFAQT FFKENGLYVF AAMLAAMFAN ISVEAIKWKR LVKSITVIPF STSLMAVYSG IVAGIITPHG IGDYVGRVLF IHSEKRFESI GSVLFSRVAQ LCITCITGVA AVIYFYFFIE EDAHMLLALA VACVTLVLIC VAWNYRAWLL DKMKHVPLLK NIEKWFEQLR MYNNLLFAET LGLSAFRYLI FLSQFVCLLM YFGVDLPIEI LITGSVFTFF VKSVIPSFLD IGVRELAAVF FFSAYHIADE KVLLASLSLW FFNLLIPAVI GLFCMFKIEY RKRT
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