| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2152 |
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| Symbol | basR |
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| ID | 4187076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2502471 |
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| End bp | 2503148 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638072152 |
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| Product | two-component response regulator |
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| Protein accession | YP_678757 |
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| Protein GI | 110638548 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.138022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTAT TGCTGGTTGA TATATCTGGA GATGTTCCGG AACTGCGTAA AAATCTTACG
GAAGACGCTG CCTTTTCTGT GCATACCGTC CGGGAGATCC GGACGGCTTC CGAACTGATT
CAGCTGTATG AATATGATTG CATTCTTTTC AAGTATCAGG AATTAACGGA TAACCTCCGG
CCTTTATTAA CAGATCTGTA CCGGAAGAGT GCTGAAACAG GCATTATTAT TTTATCTGAA
ACACTGAGCA TTGCAGATAA AGTTCAATTC CTGAATGCCG GTGCTGATGA CTGTTTATCG
GCGCCTTACA ATACGGAAGA ACTTAAAGCA CGTATCCTGG CTGTTATCCG GAGAAAAAAA
TTCAATACCG GAAGTTCTGT TCATATTGCC AATGTGGTGG TTGATCTTGC CGCACAGTCC
ATTTGTGTGT GGGATAAGAC TGTGCTGTTA ACACGTACGG AGTATGATCT GTTTCTGTTT
CTGATCATGA ACCGTTCATC AACCGTATCA CAGACAAAAA TTGCAGATTA TTTATGGGGA
GATACTGCAG AAGATAAAGA AGCTTCCAAT CTGCTGATAG CACATATTAA GAATCTCCGT
AAAAAATTAA AACAAGCTAA AGCAGAATTA GAAATTAAAA ACGTGTATGG CATTGGTTAT
ACACTGATAG AACTTTAA
|
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| Protein sequence | MKVLLVDISG DVPELRKNLT EDAAFSVHTV REIRTASELI QLYEYDCILF KYQELTDNLR
PLLTDLYRKS AETGIIILSE TLSIADKVQF LNAGADDCLS APYNTEELKA RILAVIRRKK
FNTGSSVHIA NVVVDLAAQS ICVWDKTVLL TRTEYDLFLF LIMNRSSTVS QTKIADYLWG
DTAEDKEASN LLIAHIKNLR KKLKQAKAEL EIKNVYGIGY TLIEL
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