Gene CHU_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2133 
Symbol 
ID4184618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2476634 
End bp2478445 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content36% 
IMG OID638072133 
Producthypothetical protein 
Protein accessionYP_678738 
Protein GI110638529 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAT CACTTTTTAT TAAGCAAAAT AAACAAAAGT GGAAAGATTT AGAAAAGCAT 
TTAGCGTCTG AACAAAAAGA TCCGGACAAG TTAAGTGATT TATATATTCA GGTAAGTGAT
GATCTATCCT ATGCGCGTAC GTTTTATCCA AACAGGTCTG TAAGACTCTA CCTGAACAAC
TTAGCTCAAT CCGTTTATTC CAATATTTAT AAAAGCCGCC GTTCAAAATG GTCGGATATT
GTATTCTTCT GGAAAGAAGA ATTACCAAAA ATTGTATGGG ATTCCAGAAA GGAATTAAAC
ATCAGTTTTT TTGTATTTGT GCTTGCTGTA TCCATCGGTG TTTTTTCAGC CATACAGGAC
CCGAATTTTG TGCGTGTTAT TCTAGGCGAT GAATATGTAA ACAATACGCT TAAAAATATT
CAGAACGGCG ATCCTATGGC CGTATACAAG CAATCCAAGA ATATGGATAT GTTTTTAGGC
ATTACAATTA ATAATGTAAA GGTAGATTTC TTAACGTTCG CAAGCGGGCT CTTTTTGGGA
ATCGGTTCTA TTTTAATTAT GCTCTTCAAT GGTGTAATGG TTGGCGTGTT TCAATACTTC
TTTGTGCAGC AGGGTTTATT TATTGAATCT GCCTTAACGA TCTGGCTGCA CGGGACGCTG
GAAATGGCGG GCATGGTACT GGCCGGCGCT GCTGGTATAC GTATGGGCAG CGGATTGATC
TTTCCCGGAA GCTACTCCCG TTTACAAGCC TTTCAACGCT CTGCCATGCA TGGCTTTAAA
CTGCTTATGG GAACAGTACC CATTACGATC TTCGCGGCTG TTATTGAAAG TTTTTTAACC
CGCTTTACAG AAACACCTGA TCTTGTAAGA TTTGCACTTA TCCTGCTTTC TTTATTTTTT
ATTGTTGGAT ATTTCATTGT ATATCCGATC ATAAAAAACA GAAATGGTTT TTCTACCTTT
ATTAAACAAA CAAAAATTTC AGCGGCAGAT TTTAAAACAC CTTCTACTAC CAGTATTGAT
GACAATACCG AACTGATACG TAATTCATTT TCGCTGTTCC ATCATTATCT GTTTTTGAAT
GCTCCGTTGA AATTAGTGTC TCTGGTACTT TCAACAGGTT TGCTGATCGT TTCGCTGCAT
GAAGTTCTTC CCGAAGACAT TGATTACAGA CAATGGTTTT TCTTTACGCA TTTTCTGGAT
TCGAATTTAC CGGTCTACAT TCATGCCATG CATGTATTCA ATTTATCTAT TCTGTTGTTT
TTTGTCACGT ACAACATCAG TTGTCTGGTT AAAGATAAAG CGTTTACTCT TATTGTCTTT
TCGCTACAGA ATTATTATAA ATCATTTATA ACTGCGCTGC TGATTTATAC GTTGTTTTTT
CTGCCAAATG AAACCCTGAT CTTTTTCGCA GTTATATTAC TGACTCCTCC ATTATTTATT
ATCCTTATCG TTTCAGTGAT CGAAGAACAG CATTACTTTC AATCGATCAC GTTATCCTTT
AGCTATATGC AAAAGCAGTA TATGTCAGTT GTTGGTTTAT TTGTTTTGTT ATCCGGCTGC
ATGTCGCTGT ATTATCTGTT TCTTGAATCT CCATTTACGT ATTTCTTTAT TGAGTTTGTA
CTCTTTAATA TAGATGTGGA TGCTGAAACA TTACGCTGGA TCTACATTTC TTTTTACAGC
ATTTTATCTT ACGCAGGTAT CTTTTATTTA CTGCCGCTGT GTGCATATGG TACAATGTGG
AAGTTTTTCA GTTTAAAGGA AATTAAGTAT GCAGGTAACT TATTCAATAA AATTCATTCA
AACTGGAAAT AA
 
Protein sequence
MKESLFIKQN KQKWKDLEKH LASEQKDPDK LSDLYIQVSD DLSYARTFYP NRSVRLYLNN 
LAQSVYSNIY KSRRSKWSDI VFFWKEELPK IVWDSRKELN ISFFVFVLAV SIGVFSAIQD
PNFVRVILGD EYVNNTLKNI QNGDPMAVYK QSKNMDMFLG ITINNVKVDF LTFASGLFLG
IGSILIMLFN GVMVGVFQYF FVQQGLFIES ALTIWLHGTL EMAGMVLAGA AGIRMGSGLI
FPGSYSRLQA FQRSAMHGFK LLMGTVPITI FAAVIESFLT RFTETPDLVR FALILLSLFF
IVGYFIVYPI IKNRNGFSTF IKQTKISAAD FKTPSTTSID DNTELIRNSF SLFHHYLFLN
APLKLVSLVL STGLLIVSLH EVLPEDIDYR QWFFFTHFLD SNLPVYIHAM HVFNLSILLF
FVTYNISCLV KDKAFTLIVF SLQNYYKSFI TALLIYTLFF LPNETLIFFA VILLTPPLFI
ILIVSVIEEQ HYFQSITLSF SYMQKQYMSV VGLFVLLSGC MSLYYLFLES PFTYFFIEFV
LFNIDVDAET LRWIYISFYS ILSYAGIFYL LPLCAYGTMW KFFSLKEIKY AGNLFNKIHS
NWK