Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2133 |
Symbol | |
ID | 4184618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2476634 |
End bp | 2478445 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638072133 |
Product | hypothetical protein |
Protein accession | YP_678738 |
Protein GI | 110638529 |
COG category | [S] Function unknown |
COG ID | [COG1300] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAT CACTTTTTAT TAAGCAAAAT AAACAAAAGT GGAAAGATTT AGAAAAGCAT TTAGCGTCTG AACAAAAAGA TCCGGACAAG TTAAGTGATT TATATATTCA GGTAAGTGAT GATCTATCCT ATGCGCGTAC GTTTTATCCA AACAGGTCTG TAAGACTCTA CCTGAACAAC TTAGCTCAAT CCGTTTATTC CAATATTTAT AAAAGCCGCC GTTCAAAATG GTCGGATATT GTATTCTTCT GGAAAGAAGA ATTACCAAAA ATTGTATGGG ATTCCAGAAA GGAATTAAAC ATCAGTTTTT TTGTATTTGT GCTTGCTGTA TCCATCGGTG TTTTTTCAGC CATACAGGAC CCGAATTTTG TGCGTGTTAT TCTAGGCGAT GAATATGTAA ACAATACGCT TAAAAATATT CAGAACGGCG ATCCTATGGC CGTATACAAG CAATCCAAGA ATATGGATAT GTTTTTAGGC ATTACAATTA ATAATGTAAA GGTAGATTTC TTAACGTTCG CAAGCGGGCT CTTTTTGGGA ATCGGTTCTA TTTTAATTAT GCTCTTCAAT GGTGTAATGG TTGGCGTGTT TCAATACTTC TTTGTGCAGC AGGGTTTATT TATTGAATCT GCCTTAACGA TCTGGCTGCA CGGGACGCTG GAAATGGCGG GCATGGTACT GGCCGGCGCT GCTGGTATAC GTATGGGCAG CGGATTGATC TTTCCCGGAA GCTACTCCCG TTTACAAGCC TTTCAACGCT CTGCCATGCA TGGCTTTAAA CTGCTTATGG GAACAGTACC CATTACGATC TTCGCGGCTG TTATTGAAAG TTTTTTAACC CGCTTTACAG AAACACCTGA TCTTGTAAGA TTTGCACTTA TCCTGCTTTC TTTATTTTTT ATTGTTGGAT ATTTCATTGT ATATCCGATC ATAAAAAACA GAAATGGTTT TTCTACCTTT ATTAAACAAA CAAAAATTTC AGCGGCAGAT TTTAAAACAC CTTCTACTAC CAGTATTGAT GACAATACCG AACTGATACG TAATTCATTT TCGCTGTTCC ATCATTATCT GTTTTTGAAT GCTCCGTTGA AATTAGTGTC TCTGGTACTT TCAACAGGTT TGCTGATCGT TTCGCTGCAT GAAGTTCTTC CCGAAGACAT TGATTACAGA CAATGGTTTT TCTTTACGCA TTTTCTGGAT TCGAATTTAC CGGTCTACAT TCATGCCATG CATGTATTCA ATTTATCTAT TCTGTTGTTT TTTGTCACGT ACAACATCAG TTGTCTGGTT AAAGATAAAG CGTTTACTCT TATTGTCTTT TCGCTACAGA ATTATTATAA ATCATTTATA ACTGCGCTGC TGATTTATAC GTTGTTTTTT CTGCCAAATG AAACCCTGAT CTTTTTCGCA GTTATATTAC TGACTCCTCC ATTATTTATT ATCCTTATCG TTTCAGTGAT CGAAGAACAG CATTACTTTC AATCGATCAC GTTATCCTTT AGCTATATGC AAAAGCAGTA TATGTCAGTT GTTGGTTTAT TTGTTTTGTT ATCCGGCTGC ATGTCGCTGT ATTATCTGTT TCTTGAATCT CCATTTACGT ATTTCTTTAT TGAGTTTGTA CTCTTTAATA TAGATGTGGA TGCTGAAACA TTACGCTGGA TCTACATTTC TTTTTACAGC ATTTTATCTT ACGCAGGTAT CTTTTATTTA CTGCCGCTGT GTGCATATGG TACAATGTGG AAGTTTTTCA GTTTAAAGGA AATTAAGTAT GCAGGTAACT TATTCAATAA AATTCATTCA AACTGGAAAT AA
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Protein sequence | MKESLFIKQN KQKWKDLEKH LASEQKDPDK LSDLYIQVSD DLSYARTFYP NRSVRLYLNN LAQSVYSNIY KSRRSKWSDI VFFWKEELPK IVWDSRKELN ISFFVFVLAV SIGVFSAIQD PNFVRVILGD EYVNNTLKNI QNGDPMAVYK QSKNMDMFLG ITINNVKVDF LTFASGLFLG IGSILIMLFN GVMVGVFQYF FVQQGLFIES ALTIWLHGTL EMAGMVLAGA AGIRMGSGLI FPGSYSRLQA FQRSAMHGFK LLMGTVPITI FAAVIESFLT RFTETPDLVR FALILLSLFF IVGYFIVYPI IKNRNGFSTF IKQTKISAAD FKTPSTTSID DNTELIRNSF SLFHHYLFLN APLKLVSLVL STGLLIVSLH EVLPEDIDYR QWFFFTHFLD SNLPVYIHAM HVFNLSILLF FVTYNISCLV KDKAFTLIVF SLQNYYKSFI TALLIYTLFF LPNETLIFFA VILLTPPLFI ILIVSVIEEQ HYFQSITLSF SYMQKQYMSV VGLFVLLSGC MSLYYLFLES PFTYFFIEFV LFNIDVDAET LRWIYISFYS ILSYAGIFYL LPLCAYGTMW KFFSLKEIKY AGNLFNKIHS NWK
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