Gene CHU_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2124 
SymbolhutH 
ID4184609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2468697 
End bp2470238 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content39% 
IMG OID638072124 
Producthistidine ammonia-lyase 
Protein accessionYP_678729 
Protein GI110638520 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACGA TTGGAGACCA GATAGTAACA CTAGATCAAT TAAAGGGGTT TTTATATTCA 
AACGAACAAC TTGAGATCAG TGCAGCAGCG ATTGAACGAG TAAAAAGAAA TCATCAGTTT
TTGATACATT TTTCTACCGA TAAAATCATT TATGGTATTA ATACTGGATT TGGTCCGATG
GCTCAATACC GCGTTAGTGA TGAAGATCGT AAAACCTTAC AGTATAATTT AATCCGCAGC
CATTGTTCAG GTACAGGTAA TGCACTTGAT CCGATCTATG TTAAAGCAGC CATGATTGTT
CGCTTAAACA GCTTCCTGAT CGGAAAATCC GGCGTACACG AAAGTCTGAT ATTTCTATTG
CGCGATCTGA TCAACAACAA TATTACGCCT GTTGTATTTG AACACGGTGG TGTTGGGGCA
AGCGGTGATT TAGTGCAGCT GGCACATTTG GGACAATGTC TGATCGGCGA AGGTTCTGTG
CACTACAAGG GAGAGATCCG TGAGGCTGCA GAAGTATTTG CAGAAGCAGG TATTTCACCG
ATAACCATTC AGATCAGAGA AGGCTTAGCC GTAATGAACG GAACTTCTTT TATGACAGGT
ATTGGTGTGG TGAATTTAAT TCAGGCACAA AATCTTGTAA ACTGGTCGGT GAACGCAGCA
TCATTGATCA ATGAACTGAT CGCTTCATAC GATGATTATT TTTCTTCTGA ACTGAACGAT
GTGAAATTAC ATGCCGGCCA GCGTAAAGTA GCCGCACAGA TAAGAGAACG TTTAGAAGGT
AGTACGCTGA TCAAATCACG TGCTACGCAT TTATACAAAA AAGTGGATGA AATGTATTTT
GAAGATAAAG TTCAGGAATA CTATTCGATC CGTTGTGTAC CACAGATCGT TGGCCCTATC
AGCGATACCA TTGAATATGC AACAACAGTT ATTGAAAATG AAGTAAACTC TGTTAACGAC
AATCCGGTTG TTGACGAAGC TGCCAATAAT ATTTATCACG GCGGTAATTT CCATGGCGAT
TACATTTCGC TGGAAATGGA TAAAGTGAAA ATTGCTATTA CAAAACTTGC CATGCTGGCA
GAACGTCAGG TGAATTATTT AATGAACAGC AAATTAAATA ATATGCTTCC GCCGTTTTTG
AATAAAGGTG TGTTAGGGTT GAATTTTGGT TTACAAGGGG TTCAGTTTAC AGCTACATCA
ACCGTTGCAG AGTGCCAGAC ATTAGCAAAC CCAATGTATG TACACAGCAT ACCAAACAAT
AACGACAATC AGGATATTGT AAGTATGGGT ACAAACTCTG CCTTGATATG CAGCAAAGTA
ATTGAGAACG CATATCAGGT AATTGCCATT GAATTGATGT CTATTACACA AGCTATTGAT
ATATTAAAAT TAAACGATCG CTTATCCGTA TATAACTCTT CGGTATTGGC AACGATACAT
ACTGCGTTTG TTCCATTCAC AGAAGATCAG CCTAAATACA AAGAGATACG CAACGTATTA
TCCAAACTTA GAATTTCTAT TTCTAAAGAA ACTGTTAAGT AA
 
Protein sequence
MITIGDQIVT LDQLKGFLYS NEQLEISAAA IERVKRNHQF LIHFSTDKII YGINTGFGPM 
AQYRVSDEDR KTLQYNLIRS HCSGTGNALD PIYVKAAMIV RLNSFLIGKS GVHESLIFLL
RDLINNNITP VVFEHGGVGA SGDLVQLAHL GQCLIGEGSV HYKGEIREAA EVFAEAGISP
ITIQIREGLA VMNGTSFMTG IGVVNLIQAQ NLVNWSVNAA SLINELIASY DDYFSSELND
VKLHAGQRKV AAQIRERLEG STLIKSRATH LYKKVDEMYF EDKVQEYYSI RCVPQIVGPI
SDTIEYATTV IENEVNSVND NPVVDEAANN IYHGGNFHGD YISLEMDKVK IAITKLAMLA
ERQVNYLMNS KLNNMLPPFL NKGVLGLNFG LQGVQFTATS TVAECQTLAN PMYVHSIPNN
NDNQDIVSMG TNSALICSKV IENAYQVIAI ELMSITQAID ILKLNDRLSV YNSSVLATIH
TAFVPFTEDQ PKYKEIRNVL SKLRISISKE TVK