Gene CHU_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2118 
SymbolfabF 
ID4184603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2463887 
End bp2465008 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content41% 
IMG OID638072118 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_678723 
Protein GI110638514 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA ACGTTTACAT ACTTGCTGAT TCTGTTGTGA CGCCATTGGG GCAGAGCACG 
GAAGAGAATA TGGAAAAGTT ATATAGCTTG CAATCTGCTA TCAGAACATA TACGCATCCG
CAGATCGGTA CTTTTTACGC GTCAAAATTT GAAGACGGAA AATCGTTTCA AATCAAAAAA
GATGCAGCCG GTAAAACTAA AATAGAACGT CTGTTTATTT CCTGTATTGA AAAAGCCTTA
GAACGTACGG AAATTGATGT AGAAAATGCT AACGTCTTGT TTGTATTTGC TTCAACAAAA
GGAAACGTAG AATACCTGAC AGACGAAACA TTTGATAAAA ACCGTTTACG CATCGGGATA
ACGGCACAAG ACGTTACCGC CTATTTTAAT AATCCCAATA CACCTATTGT TGTATCCAAC
GCCTGTATCT CAGGCTTACA GGCCATTCAA TACGGGTATG AAGTTTTGCA GGACAACCGT
TACACACATG TAGTGGTTAC AGGAGCAGAT TGTTTTTCAG AATTTATTCT GTCCGGCTTT
CATTCCTTCC AGGCACTTAG CCCGTTTCCA TGCAAACCAT TTGATAAAGC ACGTGCAGGT
TTATCCTTAG GAGAAGGCTG CGGCACATTG ATATTAAGCA ATAAAAAAAC TGATGCAGCA
GCTATTGAAA TTCTATCGGT TGTATCTTCC AATGATGCCA ATCACTTGTC TGGTCCTTCA
AGAACAGGAG AAGGGTTGTC GTCTGCTATC CTTGGCGCGA TAAACGAAGC CGGTATTACC
GCAGAGCAGA TCGACGTTAT TTCAGCACAC GGAACAGCAA CGCTCTATAA CGATGAAATG
GAATCGATGG CATTTAAAAC AGCAAACCTG GAAGCAAAAG CTGTTTATAG TGTAAAAGGC
AATATTGGTC ATACGCTGGG CGCGGCAGGT ATTATTGAAA CCATTTACCT GGCGCAGAGT
TTACAAAATA ACATGCTTGT TCCATCCATT GGTTTTACTG AAACCGGTAC AAGCGTAGAA
TTAAATGTTA CACGCCAGTC CACTCTTAAA ACCATGCAGA TCGGCTTGAA AACAGCGTCT
GGTTTTGGCG GAGGTAACAC CGCTTTACTT TTAAAGAAAT AA
 
Protein sequence
MKNNVYILAD SVVTPLGQST EENMEKLYSL QSAIRTYTHP QIGTFYASKF EDGKSFQIKK 
DAAGKTKIER LFISCIEKAL ERTEIDVENA NVLFVFASTK GNVEYLTDET FDKNRLRIGI
TAQDVTAYFN NPNTPIVVSN ACISGLQAIQ YGYEVLQDNR YTHVVVTGAD CFSEFILSGF
HSFQALSPFP CKPFDKARAG LSLGEGCGTL ILSNKKTDAA AIEILSVVSS NDANHLSGPS
RTGEGLSSAI LGAINEAGIT AEQIDVISAH GTATLYNDEM ESMAFKTANL EAKAVYSVKG
NIGHTLGAAG IIETIYLAQS LQNNMLVPSI GFTETGTSVE LNVTRQSTLK TMQIGLKTAS
GFGGGNTALL LKK