Gene CHU_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2092 
Symbol 
ID4183471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2439994 
End bp2440680 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID638072092 
Producthypothetical protein 
Protein accessionYP_678697 
Protein GI110638488 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCAA CGTACAACTT ATCACCCACA TTCGATTTCT TAAAGAAGAT TTCTAAGAAT 
AATAACAGAG AATGGTTCAC CAAAAACAAA GCAATGTATG AAGCAGCTTA TGGCCAGCTG
ATCAGCTTTG CAGATGCGCT GCTGGTTGAA ATGAACAAAC ATGATACGAT TGAAACAGCT
ACAGGCAAAA AAAGTTTATA TCGTATTTAT AACGATGTGC GGTTTTCAAA AGATAAAAGT
CCGTATAAAA ACCACTTAGC CGGCAGTTTG CGCCGTGCAA CCAAACAATT ACGGGGTGGG
TATTATTATC ATATTGAACC GGGCAACTCC TTTCTTGCCG GTGGTTTCTG GGCGCCCAAT
GCAGAAGATC TGCTACACAT CCGCCGGCAT CTGTCTGAAG ATCCAAAAAC ATTAAAAAAG
ATTTTAAATC AGCCGGTATT CAAAAAAACA TTTGGCAGCC TGCTGGGAGA ACAGGTCAAG
ACAGCGCCAC GCGGATTTGA CATTACCGAT CCGGCTATCG AATTGATCCG CAACAAACAG
TTTATTGTAA AACATACGTT CACAAACGAA GAAGTACTTT CCCAAAACTT TCATGTAACC
GTGTCAAATA CATTCAAAAA AATGCGGCCG TATTTAGACT ACATGAGTGA GATATTAACT
ACCGATCTGA ACGGAGAAGC GTTGTAA
 
Protein sequence
MQSTYNLSPT FDFLKKISKN NNREWFTKNK AMYEAAYGQL ISFADALLVE MNKHDTIETA 
TGKKSLYRIY NDVRFSKDKS PYKNHLAGSL RRATKQLRGG YYYHIEPGNS FLAGGFWAPN
AEDLLHIRRH LSEDPKTLKK ILNQPVFKKT FGSLLGEQVK TAPRGFDITD PAIELIRNKQ
FIVKHTFTNE EVLSQNFHVT VSNTFKKMRP YLDYMSEILT TDLNGEAL