Gene CHU_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2059 
Symbol 
ID4185815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2408705 
End bp2409748 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content38% 
IMG OID638072059 
Producthypothetical protein 
Protein accessionYP_678664 
Protein GI110638455 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.383328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.370855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TTTCGATTAT TCAAGATTCT GTTTACAGTA AAAAACAACA CTACAATTTT 
ATTGAACGGT TTTATCTTAC GTTGATCCGC GATGAACGCG ATCTGCCTTT TGTAAAACTT
ACAGTAACAA TTCTGTTGAC ACTTATTCCA CTGGGCGTAT TTTTATATGT GCCCGGCCTG
CCTGCTTTGG TATGGTGGCC TGCAGCAGTA ATTTATTTCT TTCTGAATAA CTTTTATTTC
AAAGCACCTT TCGGTCTAAT GCTGCATTGT ACCTGCCATA GCAAGTTGTA CAAATACAAA
TATGAAAAGC TGAATCTTAT ACTGCCTTGG TTTGTAGGCC TCTTCTTTGG GCAAACACCG
GAAACGTATT TCAGCCACCA TATTGGTATG CATCATATTG AAAATAACCT GGAAGAAGAC
GAAAGCAGCA CGATGGGATA TCAGCGTGAT AGCTTTCGTG ATTTTATGAA ATACTTCGGT
TCATTTATGT ACCGCGGACT GGTAGATCTA TCCATGTATT TTAACCGTAA GAAACGCGAA
AAGCTTTTGG TAAAGACTGT TCGCGGTGAA GTGTTGTATA TCCTTATGTG TGTGGGATTA
TGTGTGATAA ACTGGCAGGC AACAGTTGTT GTATTTATTC TACCCTTGCT GATTTCCCGT
TTTATTATGA TGCTTGGTAA CTGGACTCAG CATTCTTTTA TCGATGCCGC AGATCCGGGT
AACCATTATA AAAACAGTAT TACCTGTATC AATACCAAAT ACAATAAAAA ATGCTGGAAT
GATGGCTATC ACATCAGTCA CCATGTGAAA CCTACGATGC ATTGGACAGA GCATCCAACA
CATTTTCTTA CAAACTTAAA ACAGTACACC ACCAATAAAT CTATTGTGTT TGATGGTATC
GGTTTTCTGG AAATATTTAT TTTTCTGATG ACAAAACGAT ATGATAAGCT TGAAAAACAT
TTTGTAAATA TTGAAAACTG TTACGCTTCC GGTGATGAGG CAATCTCGCT GATGAAATAC
CGGACGCAGA AGATTGTGCG TTGA
 
Protein sequence
MKVFSIIQDS VYSKKQHYNF IERFYLTLIR DERDLPFVKL TVTILLTLIP LGVFLYVPGL 
PALVWWPAAV IYFFLNNFYF KAPFGLMLHC TCHSKLYKYK YEKLNLILPW FVGLFFGQTP
ETYFSHHIGM HHIENNLEED ESSTMGYQRD SFRDFMKYFG SFMYRGLVDL SMYFNRKKRE
KLLVKTVRGE VLYILMCVGL CVINWQATVV VFILPLLISR FIMMLGNWTQ HSFIDAADPG
NHYKNSITCI NTKYNKKCWN DGYHISHHVK PTMHWTEHPT HFLTNLKQYT TNKSIVFDGI
GFLEIFIFLM TKRYDKLEKH FVNIENCYAS GDEAISLMKY RTQKIVR