| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2045 |
|---|
| Symbol | |
|---|
| ID | 4186706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2391606 |
|---|
| End bp | 2392484 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638072045 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678650 |
|---|
| Protein GI | 110638441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03519] Bacteroidetes-specific putative membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.989878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTA AGCCTGTAAT CGGGATTGTT TTTTTATTGC TGGGTAAGAC ATTTTGCAGT
CAGGCTCAGC TTAATACAAC ACTTTTCGAA GAATTTAGTC AAACAATCAT TAATCCATAT
TTAATAAATC CGGCGGCATC TGATACTTCT TATGTATTCA AAGTACGTAT TAATGCGATA
GATGAATTGG GTTTGATTAA ATACGTAAAC AGATATTATT TGGATATGGA TAAACGGATT
GGAACCTCCC GGGCAAATTC GTATCATTTT ATAGGTTTGG AAGCTTCAAA CTCGAAAATG
GGTCAATATA TATATAGAAG CAGGTGTCAG TTTCGATACT CCTGGTACAC TCAGGTAAGT
GCGAAGGCTG CATTGTCGGC AGGCATTTCA ATTGGGTTTA TCAATTATGC GTTTCTTACT
ACACAAGGTG GTACAGGAGG TTCAGACTTT GGTCCGGATG GAATGCTTGG AATACATTAT
ATCCGGCAGA ATACGGTAAT CGGTTTTGGA GTACAGCAAT TATTCGCTCC TGTATTGATT
CCGGTGAATC AATCTTTTAA ACTGAACAGG TTATATAATA TTGATGTTTC ACAACGCTTC
AGAGTTGCGC CACGCATTAA ATTAACAACA TACGGAGTCA TTCAGTTTTC CGGCAATGAC
AATTTTTCCT ATAGTTTAGG CTTAATGAGC GATGTTGCAG ATCATGTTAT ACTAGGAGTG
AATAATTTTT CACTGAAAAA AACGTCATTT AATTTTGGTG TGCAGCATGT ACTCATTTAT
GGAACTGAGC TGTCTATTGT AACAACATAC AGCATTTACC ACAGTGTTTT TCCTACGCCA
AACAGTACAT TGGAATTATT TATGGCACTT CAGTTATAA
|
|---|
| Protein sequence | MRFKPVIGIV FLLLGKTFCS QAQLNTTLFE EFSQTIINPY LINPAASDTS YVFKVRINAI
DELGLIKYVN RYYLDMDKRI GTSRANSYHF IGLEASNSKM GQYIYRSRCQ FRYSWYTQVS
AKAALSAGIS IGFINYAFLT TQGGTGGSDF GPDGMLGIHY IRQNTVIGFG VQQLFAPVLI
PVNQSFKLNR LYNIDVSQRF RVAPRIKLTT YGVIQFSGND NFSYSLGLMS DVADHVILGV
NNFSLKKTSF NFGVQHVLIY GTELSIVTTY SIYHSVFPTP NSTLELFMAL QL
|
|---|
| |