| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1951 |
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| Symbol | rpsA |
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| ID | 4186440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2278343 |
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| End bp | 2280163 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071954 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_678559 |
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| Protein GI | 110638350 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.275526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0589831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAATA GGGTGAATAT TATGCTTACT CCAAAACCAG AAGATTTTAA CTGGGACTTA
GTTGGTGACA AAGGTTTCGG TGGTGGTTAC ACTGCTGCTG AAAAAGAAAA AATTGCTTCT
TTGTATGAAG GTACATTAAG CGAGGTTACT GAGAAACAAG TGTTAAGTGG TACCGTTGTT
GGTGTTACTG AACGTGATGT TATCATTAAC ATTGGTTTTA AATCAGATGG TCTTATTCCA
CTTTCTGAAT TCCGTGATGT AGATGGCGGC GTTAAAGTTG GTGAAGTATA CGATGTATTT
GTTGAAGATC AGGAAAACGC ATCCGGACAA TTAGTATTAT CCCGTCGTAA AGCCCGTATT
GTTAAGGCTT GGGAAAATAT TCAAGGTGCT CTTGATAATG ATATCATTAT TGAAGCGCTT
GTTAAGAGAA GAACTAAAGG TGGTTTGATC GTTGATTTAT TCGGCGTTGA AGCTTTCTTG
CCAGGTTCTC AGATTGATGT TAAACCAATC CGTGACTTTG ATATCTTCGT TGGTAAGAAA
ATGGAAGTTA AGGTTGTTAA AATCAACTAT ACAAACGATA ACGTTGTCGT ATCACACAAA
GTGTTGATCG AAAAAGATAT CGAAAAACAA AAAGCTGTAA TCCTGAACAA CCTTGAAAAA
GGTCAGGTAT TAGAAGGTGT GATCAAAAAC ATGACAAACT TCGGTGTGTT CATCGATTTA
GGTGGTGTTG ATGGTTTACT GCACATTACA GATATTTCAT GGGGCCGCAT AAGCCATCCG
CAGGAAGTAT TGAGCTTAGA TCAGAAAGTA CAGGTTGTAG TGTTGGATTT CGACGAAGAG
AAAAAACGTA TCTCTCTTGG TATGAAACAA CTTACTTCTC ATCCTTGGGA TGCGCTTGCT
GCTGATGTTG TTGTTGGTTC AAAAATCAAA GGTAAAATTG TTAACGTAGC TGATTACGGT
GCATTCCTTG AATTACACCC AGGTGTTGAA GGTTTGATCC ACGTATCAGA AATGAGCTGG
TCTCAGCACT TACGTAATCC ACAAGACTTT ATCAAAGTTG GTGATGAATT AGAAACAGTT
GTATTGACAT TAGATCGTGA CGAACGTAAA ATGTCTTTAG GTATTAAGCA ATTGACAGAA
GATCCTTGGA CTAAGTCTGA TGCGATCTCT AAATATGCTG TTGGTACGAA ACACACAGGT
TTAGTGCGTA ACTTAACAAA CTTCGGTTTA TTCATCGAAT TAGAAGAAGG TATTGATGGT
CTTGTTCACG TTTCTGATTT ATCATGGACG AAGAAAATCA AACACCCGTC TGAATTTGTT
AAGGTTGGTG ATAAACTGGA TGTAGTTGTA TTGGAGTTGG ATGTTGAAAA CAGAAGACTT
GCTTTAGGCC ACAAACAATT AGAAGAAAAC CCTTGGAATA CATTTGAAAC AATCTTCACT
CCGGGTTCTA CTCATACTGC TACACTTATC TCTAAAAACG ATAAAGGTGC TGTTCTTGAG
TTGCCATATG GTATCGAAGG TTTCGCTATG AACAAACATT TAGTGAAAGC TGATGGTGCA
AATGCAGAAC AAGGTGAATC ATTAGATTTC AAAGTATTGG AGTTCTCTAA AGATGACAAA
CGTATTGTAT TGTCTCATAC GAAAACATTC TCTGAAGTAG CTGAAGATGC AGCTGCTCCA
GCAGACAAGA AAAAGAAAGC CGCTCCTGCT AAAGGCGCGA AAGCTCCTGC AACTGCGAAA
ACTCCTGCTG TAGAGAAATC TACATTAGGT GATATCGAAG CACTTTCTAA CTTGAAAGAT
TCAATGGACG GAAAGAAGTA A
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| Protein sequence | MYNRVNIMLT PKPEDFNWDL VGDKGFGGGY TAAEKEKIAS LYEGTLSEVT EKQVLSGTVV
GVTERDVIIN IGFKSDGLIP LSEFRDVDGG VKVGEVYDVF VEDQENASGQ LVLSRRKARI
VKAWENIQGA LDNDIIIEAL VKRRTKGGLI VDLFGVEAFL PGSQIDVKPI RDFDIFVGKK
MEVKVVKINY TNDNVVVSHK VLIEKDIEKQ KAVILNNLEK GQVLEGVIKN MTNFGVFIDL
GGVDGLLHIT DISWGRISHP QEVLSLDQKV QVVVLDFDEE KKRISLGMKQ LTSHPWDALA
ADVVVGSKIK GKIVNVADYG AFLELHPGVE GLIHVSEMSW SQHLRNPQDF IKVGDELETV
VLTLDRDERK MSLGIKQLTE DPWTKSDAIS KYAVGTKHTG LVRNLTNFGL FIELEEGIDG
LVHVSDLSWT KKIKHPSEFV KVGDKLDVVV LELDVENRRL ALGHKQLEEN PWNTFETIFT
PGSTHTATLI SKNDKGAVLE LPYGIEGFAM NKHLVKADGA NAEQGESLDF KVLEFSKDDK
RIVLSHTKTF SEVAEDAAAP ADKKKKAAPA KGAKAPATAK TPAVEKSTLG DIEALSNLKD
SMDGKK
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