Gene CHU_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1947 
Symbol 
ID4186436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2275980 
End bp2276930 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID638071949 
Productoxidoreductase 
Protein accessionYP_678555 
Protein GI110638346 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.561644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0392107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATATA TTGCTTTAGG TATGGCTGCT ATTGGCCGCC CGCACTACAT TAATATCAAA 
ACAATAGATA GTCCGAAAGA TCTTACTAAA GCAGAACTTC ACGCCCATGC GACAGCTGTT
CTGGACGCTG CCTATGCAAT GGGTATACGT CATATCGATA CGGCACCAGG ATATGGTATT
GCAGAAGAAA TTTTAATAGA CTGGCTTCGC CGTTCAGGTC ATGAAGATAT GACCGTTTCT
ACTAAATGGG GCTATACCTA CACGGCAAAT TTTGAAAAAA ATCCGCTCCA GCATGAAGTA
AAAGAACACT CCTTACATGT ATTGCAACAG CAGTGGTTAT ATTCCAGGCA ATTATTGCCT
CCGCTCAATA TGTACCAGAT CCACTCAGCT ACATCGGATA GCGGCGTACT CAACAATCAG
GGCGTACTTG ATAAACTCTT TGAACTGAAG GAACAATTTG GGATTGAAAT AGGGCTGACA
ACAAGCGGTC TTACACAGAA TGCAACCATT CAACAAGCCC TTAAAATAAC AAATCAGGGC
AAACCGCTCT TCACAATTTT TCAGGTAACC TATAATGTTT TTGAACAAAG TATTGCCGAT
AGCGTAGCTC TATTAAAAAA TCAGGGAGCA CGCATTATTA TAAAAGAAGG ACTGGCAAAC
GGCAGAATTT TTACTTGTGC AGATTTTCCG CAGTATGCTC CTGCATATGC GTTATTGGAA
CGGTTAGCAG GAAAATATCA TGTAGGTGTT GATGCTGTTG CCTTACGTTT TTGCATAGAT
GCTTTACGTC CACTATATGT ATTAAGTGGT GCAGCAACTA TTGTTCAATT AAAAGAAAAT
CTATTAGCTG AAACGTTTAC ACTCCAATCA GAAGAACTGG AAGAATTAAA ATCTATTCAT
GTTGCGTCAG AAGCATACTG GAATGAACGT AAACAACTTA AATGGAATTA A
 
Protein sequence
MTYIALGMAA IGRPHYINIK TIDSPKDLTK AELHAHATAV LDAAYAMGIR HIDTAPGYGI 
AEEILIDWLR RSGHEDMTVS TKWGYTYTAN FEKNPLQHEV KEHSLHVLQQ QWLYSRQLLP
PLNMYQIHSA TSDSGVLNNQ GVLDKLFELK EQFGIEIGLT TSGLTQNATI QQALKITNQG
KPLFTIFQVT YNVFEQSIAD SVALLKNQGA RIIIKEGLAN GRIFTCADFP QYAPAYALLE
RLAGKYHVGV DAVALRFCID ALRPLYVLSG AATIVQLKEN LLAETFTLQS EELEELKSIH
VASEAYWNER KQLKWN