Gene CHU_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1943 
Symbol 
ID4186432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2273666 
End bp2274145 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID638071945 
Producthypothetical protein 
Protein accessionYP_678551 
Protein GI110638342 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.278152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0324993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATGCA TGCCCTACTT TTGTTTCATA CTAAAGAAAC ATAATATGGA AAAACGATTA 
AACGTAGAAG CATTAGAACC TAATGCATAC AAGGCAATGA TGGGTATTGT TGGTTATCTT
CAGACTACCG CACTCAGTAA CGTGCACAAA CATTTTATCT CCATCCGCGC ATCACAGATC
AATGGCTGTG CACATTGCCT GAACATGCAT ACCAAAGAAG CGCTGAATAA CGGAATAACA
CAGCAGCGTA TATTTTTATT AAGTGCATGG AAAGATACAA ACCTTTTTAC TGAAGATGAA
AAAAGCATTC TTGCCTTAAC AGAAGAAGTT ACACGGATCA GCGAACACGG TCTTTCAGAT
GCGGTATATA AAAAAGCTGT AGAACTGCTG GGCGAAAATT ATGTTGCGCA AGCTATTATG
GCCATTGTTG CCATTAATGG CTGGAACCGG ATTGCAGTAA GTACCAATCT TGCAATCTAA
 
Protein sequence
MTCMPYFCFI LKKHNMEKRL NVEALEPNAY KAMMGIVGYL QTTALSNVHK HFISIRASQI 
NGCAHCLNMH TKEALNNGIT QQRIFLLSAW KDTNLFTEDE KSILALTEEV TRISEHGLSD
AVYKKAVELL GENYVAQAIM AIVAINGWNR IAVSTNLAI