Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1943 |
Symbol | |
ID | 4186432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2273666 |
End bp | 2274145 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071945 |
Product | hypothetical protein |
Protein accession | YP_678551 |
Protein GI | 110638342 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.278152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0324993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATGCA TGCCCTACTT TTGTTTCATA CTAAAGAAAC ATAATATGGA AAAACGATTA AACGTAGAAG CATTAGAACC TAATGCATAC AAGGCAATGA TGGGTATTGT TGGTTATCTT CAGACTACCG CACTCAGTAA CGTGCACAAA CATTTTATCT CCATCCGCGC ATCACAGATC AATGGCTGTG CACATTGCCT GAACATGCAT ACCAAAGAAG CGCTGAATAA CGGAATAACA CAGCAGCGTA TATTTTTATT AAGTGCATGG AAAGATACAA ACCTTTTTAC TGAAGATGAA AAAAGCATTC TTGCCTTAAC AGAAGAAGTT ACACGGATCA GCGAACACGG TCTTTCAGAT GCGGTATATA AAAAAGCTGT AGAACTGCTG GGCGAAAATT ATGTTGCGCA AGCTATTATG GCCATTGTTG CCATTAATGG CTGGAACCGG ATTGCAGTAA GTACCAATCT TGCAATCTAA
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Protein sequence | MTCMPYFCFI LKKHNMEKRL NVEALEPNAY KAMMGIVGYL QTTALSNVHK HFISIRASQI NGCAHCLNMH TKEALNNGIT QQRIFLLSAW KDTNLFTEDE KSILALTEEV TRISEHGLSD AVYKKAVELL GENYVAQAIM AIVAINGWNR IAVSTNLAI
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