| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1927 |
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| Symbol | |
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| ID | 4184276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2257419 |
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| End bp | 2258819 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071929 |
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| Product | sugar transferase |
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| Protein accession | YP_678535 |
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| Protein GI | 110638326 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.26599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.291819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACGAC CGTATTATAG TTTAATTCCT GCTTCTTTAG ATTTTGTGGC TTCCGTGGTG
GCATGGATTA TATTCTTCTA TAATCGCAAG CAGCTGCTGC ATGAAGAAAC GCAAAGCATT
GAAGTTTCTC TTATTATGAA TGCTGCAGTT ATTGGTCTGT TTTGGGTTGG ACTGAATATA
TTGGCGGGTT CATACACAGA TGTGTTTGGC AAGACACGGA TTCAGGAATT ATTCAAAGGT
TTCAATCATA CATTAATTGG TGTGGTAATC ATATTTTTTA CATTGCTGCT GGATGATCAG
GGGATTAATC AGTATCAGGA ATATTATAAA ACATTTGCTT CTTATTTTAT TATACAGTTT
TTGTGTACGT CTTTTTCTAA AATAATTTCC TTTACGTATT TACGCGAACA GGTTGCTTCC
GGGAAAATAT ATTTTAATAC ACTGATTGTT GGTTCAGGTA AAGCTGCACG AAATGTGTAT
GATGAATTGC AGCAACGTAA GTCTACACTT GGTTTTTCCT TTGTTACCTA TATTCCCACA
CCAATATCTA ATGTTGACCT GTGTGCACCA GTATTAAAAT CAATCGGCGA TCTGGAACGT
ATTAATACAG TTATTCACCG CTGCCGCATT GATCGGGTAA TGATTGCACT TGAAAAAGAA
GAACATGAAT ATCTTGAACA GGTATTGGGA TCGATTGAAG GAGAATCTGT AAAAACGAAT
ATCATTCCGG AGAATTATCA GTTAATTCTG GGTTCTGTAA AAGTAAAGTT ATTATCCAAT
TTACCTTTGC TGGAAATTAA TCAGGACCTG ATACCTGTGT GGCAAAAAGT ATTGAAGCGG
TTTATTGATA TTATTGCTGC ATTGTTTGTG CTGGTAGCAG GTGCTCCATT CTTGCTTGTT
GTTGCATTGC TTACAAAACT AAGTTCTAAA GGCCCTGTGT TCTATAAACA GGAACGTATC
GGCAGAAATG CCGAACCGTT CAAAATTATA AAATTCAGAA GCATGTATAT TGATTCTGAA
AAATTAGGAC CTGCGCTGGC TAACGATAAA GACAGCCGCA TAACACCTTG GGGAAAGATC
ATGCGTAAGA CACGGCTGGA TGAATTTCCG CAGTTCTATA ACGTGCTGAA AGGTGATATG
TCGCTGGTTG GCCCACGGCC GGAACGCCAG TTCTTCATTG ATCAGATCAT GGCACAGGCA
CCGTATTACA AGCACTTGCA TAAGGTACGT CCGGGTATTA CGTCCATGGG ACAGGTGAAA
TTCGGTTATG CTGAAAACGT AGACCAGATG GTTGACCGCT TACGTTATGA TATTTTATAC
ATAGAAAATA TGTCTCTCTC GCTCGACTTC GAGATCATGC TTGATACTGT ATTGATCATG
TTCCAGGGTA GAGGAAAATA A
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| Protein sequence | MKRPYYSLIP ASLDFVASVV AWIIFFYNRK QLLHEETQSI EVSLIMNAAV IGLFWVGLNI
LAGSYTDVFG KTRIQELFKG FNHTLIGVVI IFFTLLLDDQ GINQYQEYYK TFASYFIIQF
LCTSFSKIIS FTYLREQVAS GKIYFNTLIV GSGKAARNVY DELQQRKSTL GFSFVTYIPT
PISNVDLCAP VLKSIGDLER INTVIHRCRI DRVMIALEKE EHEYLEQVLG SIEGESVKTN
IIPENYQLIL GSVKVKLLSN LPLLEINQDL IPVWQKVLKR FIDIIAALFV LVAGAPFLLV
VALLTKLSSK GPVFYKQERI GRNAEPFKII KFRSMYIDSE KLGPALANDK DSRITPWGKI
MRKTRLDEFP QFYNVLKGDM SLVGPRPERQ FFIDQIMAQA PYYKHLHKVR PGITSMGQVK
FGYAENVDQM VDRLRYDILY IENMSLSLDF EIMLDTVLIM FQGRGK
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