| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1899 |
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| Symbol | |
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| ID | 4187117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2218253 |
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| End bp | 2219476 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071897 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_678507 |
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| Protein GI | 110638298 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.512504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0507183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATA AACCCACTCG TGAAGAATTA GAACATCAGA TAACTGAGCT CAGGCATCAG
AATGAGCTCC TCCGGCTGCT GCCTGCGGTT AATCTTAAAG AACAAATCAA TGCCATTGAA
TTTTTAGTTG CCGGTAGTGC ATATGCACCT ACTATATTGA ACAATATGGG AGATTCAGTA
TTTGTAAAGG ATGAGCAAAG CCGGTTGCTT TTTGTGAATG ATGCTTTTTG CCAGATGTTT
AATCTGCCAA GAGAAGAGAT CATTGGGAAG ACACTTGCTG AAGATGTGCC CGCAAACGAA
CGCGAAAGTT TTTTGAAAAT AGATAAGGAG GTATTATTTG ATGGGCTGGA AAATATCAAT
GAAGAAACGC TGACTGTGCG TGATGGAGAA ACATTAACAA TTTCTACACG GAAATCACGC
TTTATTGATA CGAGTGGCAA AAGATTTCTT GTCGGTGTAA TCCGGGATAT TACAAAACGT
AAAAGGGCAG AGCAGGCGTT ACGGGAAAGT GAAAAAAGGT ATAGAGAACT TAATGCAACA
AAGGATAAGT TGTTTTCAAT TATAGCCCAT GATCTCCGGG GGCCGTTTAA TAATATTGTT
TCATTGGCAG GTTTATTACT GGATGCAGTA AAAGTACCTG ATGTTGAAAG CTCTCAGCAG
TACGTAGGCA TGATACATTC TACTGCTCAG CATACATTAG TGTTGCTTGA TAATTTATTA
AACTGGGCGA AATCTCAAAC CGGACAGATT GAATATAAGT CAGAAAAAAT ATGTGTGTCT
GCAATTATTC AAGAGATTGT GGATCTCTCA CAAACCAGTG CACAAACAAA AAATATTTCG
TTGGAACATA CTGCATCTGC AGAGATAGAG ATCTGTTCGG ATGAAAAAAT GCTAAAAACA
ATTTTACGAA ACCTTATTTC GAATGCTATT AAGTTTACCA GGAAAGGTGG GCGGGTCTGT
GTATCGGTAA AATCAAATCA GAATCAGATT GAAATTACTG TTTCAGATAA CGGTATCGGA
ATTAATGAAC AGACACGTAA GAAAATTTTT GGAATCTCTT CCAACATTTC ATCTCCAGGT
ACTGCAAATG AAAAAGGTTC GGGTTTTGGG CTGGTCCTAT GTAAAGAGTT TGTTGACAAG
CTTGGCGGTA CTATTGGCGT TAACAGTATC GAAGGTAAAG GCAGTGACTT TACATTTACG
CTGCCGGTAA AAGCAGAAGG ATAA
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| Protein sequence | MNHKPTREEL EHQITELRHQ NELLRLLPAV NLKEQINAIE FLVAGSAYAP TILNNMGDSV
FVKDEQSRLL FVNDAFCQMF NLPREEIIGK TLAEDVPANE RESFLKIDKE VLFDGLENIN
EETLTVRDGE TLTISTRKSR FIDTSGKRFL VGVIRDITKR KRAEQALRES EKRYRELNAT
KDKLFSIIAH DLRGPFNNIV SLAGLLLDAV KVPDVESSQQ YVGMIHSTAQ HTLVLLDNLL
NWAKSQTGQI EYKSEKICVS AIIQEIVDLS QTSAQTKNIS LEHTASAEIE ICSDEKMLKT
ILRNLISNAI KFTRKGGRVC VSVKSNQNQI EITVSDNGIG INEQTRKKIF GISSNISSPG
TANEKGSGFG LVLCKEFVDK LGGTIGVNSI EGKGSDFTFT LPVKAEG
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