Gene CHU_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1813 
Symbol 
ID4185039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2128607 
End bp2129440 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID638071812 
Producthypothetical protein 
Protein accessionYP_678422 
Protein GI110638213 
COG category[S] Function unknown 
COG ID[COG2996] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0500461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.539487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATAG AAGTAGGAAA AAATAATGTC TTAACTGCTT TACGCATGAC AAGCGTAGGT 
ATGTATCTGG GCAACGATGA AGGCGAAGAG GTTTTATTAC CTAATAAATA TGTACCCGAT
GATTTCAATG TAGATGACAG CATTGATGTC TTTATATACA AGGATTCCGA AGACCGCATT
ATTGCAACAA ACCTGGAACC TAAAATTAAA TTAAATGAGT TTGCTTGTTT GATTTGTAAA
GATGTAAACA ACATTGGTGC TTTCCTGGAT TGGGGCCTGG AAAAAGATCT GCTTGTTCCC
TTTCGTGAAC AAGGCAAAAA AATGGAAGTT GGCAAACGCT ATCCGGTTTA TCTGTATCTG
GATGAACGCA CAGGCAGACT AGCCGCGTCC AGCAAGATAG AGAGCTTTAT TGAAAAACAG
AACATCAGAT TAGAAGTGGG TGAAAAAGTT AATTTGTTGA TTTGTTATAC CAGTGATCTT
GGTGTGAATG TAATCATCAA TAATACCTAC AAAGGAATTA TCTATCACAA CGATCTCTTC
ACGTATATTT CCATTGGCGA TAAAGTTGAA GGATATATTA AAAATATCCG TGAAGAAGGA
AAGATTGATG TAACGCTGCA GAAGCTTGGC TACAGCCAGA TTGAAGACGC TGCAGAAAAA
ATCTTATCAA AACTTCGTGC CTCTGCGGGT GTTTTAAAAT TAACGGACAA AAGTGATTCA
GAAGAAATCA TGTTCCGCTT GCAGATGAGT AAAAAGAATT TTAAGAAAGC AATCGGTGGT
TTATATAAAC AAGGGCTGAT CCGTCTGGAA GAAGACGGCA TATATCTGGT CTAA
 
Protein sequence
MMIEVGKNNV LTALRMTSVG MYLGNDEGEE VLLPNKYVPD DFNVDDSIDV FIYKDSEDRI 
IATNLEPKIK LNEFACLICK DVNNIGAFLD WGLEKDLLVP FREQGKKMEV GKRYPVYLYL
DERTGRLAAS SKIESFIEKQ NIRLEVGEKV NLLICYTSDL GVNVIINNTY KGIIYHNDLF
TYISIGDKVE GYIKNIREEG KIDVTLQKLG YSQIEDAAEK ILSKLRASAG VLKLTDKSDS
EEIMFRLQMS KKNFKKAIGG LYKQGLIRLE EDGIYLV