Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1809 |
Symbol | |
ID | 4185035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2123890 |
End bp | 2124747 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638071808 |
Product | hypothetical protein |
Protein accession | YP_678418 |
Protein GI | 110638209 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00108479 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATC AATTAGAATA TCTTGTAACC AAATCAGATT TTATTTTACC TGGCTTAGTG ATTTTTTTAC TTGTCTTTTG GGCAGGTTTT GCGTTGCTCG GCTTCTCTCT GTTTAAAGTA ATAACAGGTG CTGCTAACTT TTTCTTTGAT CGCTACATAC TTTTCGTATA TCAATTGAAC TATCAGGAGC GAGCATCTCT GGAATATAAA ATTCCTTTCT ATCAAAATTT AAAACCTTCC TTAAAAAGAA AGTTTGAGTG TAATGTAAAA TATTTTATAC AAAAAAAGGA TTTTGAAGGC CGGGACGGCT GTACCGTTAC ACCTGAAATG AAATTACTGA TAGCTGCTGC TGCCACACAA ATTTCATTCG GTCACTTCCC TACTATCTAT GAGCACTTCA GAAAAATAAT CATTTATCCG GACAAATATT TTTCAGGAAG TACACAGCGT TATCACTTGG GCGAAGTTCA GTCCAACGGT GTTATAAAAT TATCCTGGGC TGCATTTACC GAAGGGCTTC GCATAAAAAA TGATGGCGTA CATGTAGGCT TTCATGAAAT GGCGCACGCG TTAAAGATAG AAGATTCAAC CTTACATGAT ATGGAACATT GTTTCATGGA CAAAAAAGCA TTGCATGATT TCCATTCTTA TTCCAATGAC CGTATCCGCA GCCATGGATC GCAGTCTTTT ATGCGGGATT ATGCTTTCAG TAATTCAGAA GAGTTTTTTG CAGTAAGTAT TGAATACTTT TTCGAAACAC CTGCTCAATT AAGAAAAAAT GAACCTGTGG TATATGATTA TTTAACACGT ATCCTAAAGC TGGATCCGTT AAATCATACC AATCCGGTGC TTACATAA
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Protein sequence | MEDQLEYLVT KSDFILPGLV IFLLVFWAGF ALLGFSLFKV ITGAANFFFD RYILFVYQLN YQERASLEYK IPFYQNLKPS LKRKFECNVK YFIQKKDFEG RDGCTVTPEM KLLIAAAATQ ISFGHFPTIY EHFRKIIIYP DKYFSGSTQR YHLGEVQSNG VIKLSWAAFT EGLRIKNDGV HVGFHEMAHA LKIEDSTLHD MEHCFMDKKA LHDFHSYSND RIRSHGSQSF MRDYAFSNSE EFFAVSIEYF FETPAQLRKN EPVVYDYLTR ILKLDPLNHT NPVLT
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