| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1804 |
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| Symbol | lpxK |
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| ID | 4185030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2118112 |
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| End bp | 2119167 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071803 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_678413 |
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| Protein GI | 110638204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00956685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTTTC TAAAGATTTT ATTGTTACCG TTTTCATTGC TGTATGGAGG AATAACAGCC
ATCAGAAATT ATGCCTATGA CAAAGGCTGG TATAAAAGCT ATACGCTGCC GGTTGCTGTT
GTTTGTGTAG GTAATATAAA AGCAGGCGGC ACCGGTAAAA CGCCTTTTAC ACAACTTCTG
CTGCAGCAGT TTGCCGGCAA ATACAAAACA GCTGTATTAA GCCGCGGCTA TGGTCGAAAG
ACTAAGGGTT TTGTGTTGGC CACAGCAGCG TCTACCTCAG CAGAAATCGG TGATGAGCCG
CTTCAGCTCT ATACGCATGC TCAGGGAGTA TATGCAGTGG CGGTATGTGA AGACCGGGTA
GCCGGCGTTG AAAAACTGCT GCAGTTGATA CCTGATTTAA AACTCGTTAT TCTGGATGAT
GGGTTTCAGC ACCGCCGGAT CAACAGAGAT GTAAATATTT TATTGACCGA ATATCAGGCG
CCGTTTTATG CGGATTGGGT TTTGCCTGCC GGTCGTTTAA GAGAGTTCCG GAATGGGGCA
ACGCGCGCAG ATGCTGTTGT TGTTACCAAA ACACCTGCAC ATGCAGCTTT ATTAAAGACA
GATAACATAC TCCGGCATAC AGCCAAAGCT ATACCTGTTT TGTATACAAC CATTGAATAC
GGCGCTACCC GGAATGAAGA CGGAAATTAT ACCTGGCAGC CAAATGAAAA AGCTGTGCTG
GTAACAGGTA TTGCAAACCC GCAGCCACTG GTACAGTATT TGAATAGCAG GCATATTGAC
ATCATAAAAC AGTTCGAATT TAAAGACCAT TACAGCTATA CGTTACGGGA TATTCAACAA
ATGCTTGATT ATCAAAATGC AAATGATGGA GTTAAAATAG TAATGACCGA AAAAGATTGG
GTGAAAGTTG TACCTTTGCT TCGGGAGTTA AACCTTTCGA AAGGCTGGTA CTATGTTCCC
ATTCAGATCG GCATATATTC AGATCAGCAG CAACTGTTAA ACACAGTTGA AACTAAAATC
ATAGATAGAC TTAACCGTCT CACGCAGCAC ACATAA
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| Protein sequence | MIFLKILLLP FSLLYGGITA IRNYAYDKGW YKSYTLPVAV VCVGNIKAGG TGKTPFTQLL
LQQFAGKYKT AVLSRGYGRK TKGFVLATAA STSAEIGDEP LQLYTHAQGV YAVAVCEDRV
AGVEKLLQLI PDLKLVILDD GFQHRRINRD VNILLTEYQA PFYADWVLPA GRLREFRNGA
TRADAVVVTK TPAHAALLKT DNILRHTAKA IPVLYTTIEY GATRNEDGNY TWQPNEKAVL
VTGIANPQPL VQYLNSRHID IIKQFEFKDH YSYTLRDIQQ MLDYQNANDG VKIVMTEKDW
VKVVPLLREL NLSKGWYYVP IQIGIYSDQQ QLLNTVETKI IDRLNRLTQH T
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