Gene CHU_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1756 
Symbolgpm 
ID4184846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2062973 
End bp2063632 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID638071755 
Productphosphoglycerate mutase-like protein 
Protein accessionYP_678365 
Protein GI110638156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGCTA ACAAAAGTAG AATAATTTTG AGTACCAAAA AAATATACCT CGTCCGCCAC 
GGACAAACGG AATTCAATAA AAGGGGAATT GTACAAGGCA GTGCAGTAAA TTCATCGTTG
AATGACACGG GACGTGCCCA GGCGGATGCC TTTTATCAGG CATACAGGCA CATACCGTTT
GATGTGGTAT ATACATCTGC CTTGAACAGA AGCATTGAAT CTGTACAGTC CTTTATTGAT
CAGCCGATTC CGCATTTCAT CCGTCCGGGT TTGAATGAGA TCAGCTGGGG CGAAATGGAT
GGTAAACTGG CAACGGCCAC TGAACACAAT GAATATAAAG ATCTTCTGGC CCGCTGGCAG
CAAGGCGATA TTGAATTCAA AATGTGGGGT GGTGAAAGTC CGCTGGATGT ACAGAAGCGT
CAGGAACCCG TTGTAACGGA AATTCTTAAT TCTCCCTATG AAACCATTCT CATGTGTATG
CACGGCAGAG CCATCCGTAT CTTATTGAGC CTGATTACTA AAACAAGCCT GGCTGAAATG
GATCAGTTTC AGCACGCCAA TCTATGTTTA TATGTATTGG AAGGAAGTGT GCAGGAAATA
AAAATTGTCT GCAGCAATGA TCAGCAACAT TTGGCCGGCC TGCAGCAAAT ACCGGATTGA
 
Protein sequence
MKANKSRIIL STKKIYLVRH GQTEFNKRGI VQGSAVNSSL NDTGRAQADA FYQAYRHIPF 
DVVYTSALNR SIESVQSFID QPIPHFIRPG LNEISWGEMD GKLATATEHN EYKDLLARWQ
QGDIEFKMWG GESPLDVQKR QEPVVTEILN SPYETILMCM HGRAIRILLS LITKTSLAEM
DQFQHANLCL YVLEGSVQEI KIVCSNDQQH LAGLQQIPD