Gene CHU_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1740 
Symbol 
ID4183921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2046809 
End bp2048074 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content41% 
IMG OID638071739 
Producthypothetical protein 
Protein accessionYP_678349 
Protein GI110638140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.591728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACACA GGTTACTATT CATATTCGCA TTCATTCTTT CGATAGCATT TTCTTCAAGT 
GCCAATCAGA TAGTTGTACC TATGGATGAG TCGCAGTCCA ATCACTTAAA ATCATATGGT
GTTGCTTATT GGGTGCTTAC AAAAGATGCT GCAGTAGACT GGCTATTAAA TTACCGTGGA
GGAAGTTTTG CCTTTACGTA TACACCTGCT TTCGTGAATG AACTCGTGAT CCGTGGGGTT
TCCTATGAAA TTATCTCTGA TGCGGATTAT GCAAATATTC AGGCCTTTAT CAGTAAACCT
GAAATAAATA TGGATGTGGT AAAATTGGAA AAGTATCCCA AAATTGCTGT TTATTCTCCC
AAAACGAAAC TCCCCTGGGA CGATGCGGTG ACCATGGTAC TCACCTATTC TGAAATTCCA
TATACCGTTA TTTATGATGA TGAAATCATT GGTGATTTAC TTCCTACCTA TGACTGGCTG
CATCTGCATC ACGAAGATTT TACAGGCCAA TACGGAAAGT TTTATTCCAT GTATCGCAAT
CAGCCCTGGT ATCAGCAGCA GCAGCGGGAA TATGAGGCTT CTGCAAAACG TCTGGGCTTT
AACAAAGTAT CTGAATTAAA ATTAGGCGTT GTAAAAAAGA TCCGTGATTT CTGTGCCGGC
GGCGGATATA TGTTTGCTAT GTGTTCTGCA ACAGATACGT ATGATATTGC TTTAGCGGCA
GAAGGTATTG ACATCTGCGA ATCAATGTAT GACGGTGACC CTGCAACACC CAATGCCTCG
AGCAGACTGG ACTTCAGCAA AACATTTGCC TTTCAGAACT TCAAATTAAA ATCTGATCCG
TATGAATACG AATACTCCAA TATTGATAAC AATCCCCCTG AACGCGGGCT CACGGAGAAC
AATGATTACT TTAATCTGTT TGATTTTTCT GCTAAATGGG ATGTGATCCC GACCATGCTT
ACACAGTGCC ATACACGTAC GGTACATGGT TTTATGGGGC AAACAACGGG ATTTAAAAAA
TCATTGATTA AACCGGAAGT AATTGTTTTA GGTGAAAACA AAGAAATCGG TGAAGCGAAA
TTCGTACATG GTACATACGG TAAAGGTACG TGGACATTTT ATGGTGGTCA TGATCCGGAA
GACTACCAGC ATTTCGTAGG CGAAGAACCA ACGGATCTGA ACCTGCACCC AAACTCTCCG
GGCTTCCGGC TTATTTTGAA CAATGTGCTC TTCCCTGCCG CGAAAAAGAA AAAGCAGAAA
ACTTGA
 
Protein sequence
MVHRLLFIFA FILSIAFSSS ANQIVVPMDE SQSNHLKSYG VAYWVLTKDA AVDWLLNYRG 
GSFAFTYTPA FVNELVIRGV SYEIISDADY ANIQAFISKP EINMDVVKLE KYPKIAVYSP
KTKLPWDDAV TMVLTYSEIP YTVIYDDEII GDLLPTYDWL HLHHEDFTGQ YGKFYSMYRN
QPWYQQQQRE YEASAKRLGF NKVSELKLGV VKKIRDFCAG GGYMFAMCSA TDTYDIALAA
EGIDICESMY DGDPATPNAS SRLDFSKTFA FQNFKLKSDP YEYEYSNIDN NPPERGLTEN
NDYFNLFDFS AKWDVIPTML TQCHTRTVHG FMGQTTGFKK SLIKPEVIVL GENKEIGEAK
FVHGTYGKGT WTFYGGHDPE DYQHFVGEEP TDLNLHPNSP GFRLILNNVL FPAAKKKKQK
T