Gene CHU_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1714 
Symbol 
ID4185490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2016157 
End bp2017473 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content38% 
IMG OID638071713 
Producthypothetical protein 
Protein accessionYP_678323 
Protein GI110638114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00656957 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.748921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTTCA ATACTATTTC ATTGTTTTAC ATGCAGATCA GATCAATAAA AGATTATTCA 
CCGTTTGCTC TTTTTTTACC GCTCCTTGTC CTGTACACCG CTTACGTATG TTATTTTCAT
ACCGATCAGA TGGAAGGAGA TGAAATGCGG TATATTCAGT TTGCAAAAAA CCTGCTGCAA
GGGTTTTATT CTCCTGCGTA TCCGCATATT GACTTGATTA ACGGTCCCGG TTATCCGATT
GTGCTGATGC CATTTGCAGC ATTGAGTACC CCATTGATTT TTATTACACT CTTTAATGCT
GTTTTATATT ATGTATCTGT AGTGTTTTTA TTTAAGGCCA TACAGCTAGT AACGCTTTCC
TTTAAGGCAG CCTGTATAGC AGCATTATGC TGGGGTTTGA ATATTCTTGC CTACCAGGAG
ATGCCGTGTA TACTTACCGA ATGCCTTACA GCATTTTTAA TAAGTGCTTT CAGCTATCAG
CTTATCCGTA TTTATTCAAC ACCGGGCTTT ACTTACAAAA CTCTGTTACC GGCAGGTTTC
ACCTTTGGTT TTTTAATTCT TACTAAAGTG ATCTTTGCGT ATGTATTAGT GATCTTACTT
GTATGCACAG GCATCTGTTA TGTGCTGCGC AAACATTCTG ACCTGATGTT AAAAATCGTT
TGTATCTTCT CCTTTGCACT TCTTACCATT ACCCCATATA TTATTTATAC TTATTCGTTA
ACAGGTAAGT TTTTTTATTT GAGCAGTGAA GGGGGCAAAG TATTGTATTG GATGACCTCG
TTAGATGCTC ATGAATACGG CGACTGGAAC AACAATACCT TTACAGCCAA CTGTTCGGAA
ACGTTCTGCA ATGCAGATCT TATTGCTGTA AATCATGCTG CGGATATACA ACAGATCAAT
GCGTGTAAAG ATGTACTTGA AGCAGATGCG TTGTTTAAAC ACATGGCTAT TGAACATATT
AAAACCAATC CGGTGAAATA TATTAAAAAC TGGTTTGCCA ACATTGGCCG GTTATTATTT
GGTTTTCCAG CTTCGTATTA TTTTCAAAGC CCTGCTACGT TAGTGCGTAT TTATATCAAT
TCCGTTTTGC TGCTGGCGCT GGTATATTCG TGTATTGCGG TTTTATGGAA CTTGAAAAAA
ATACCGGTGG AAATAAAGAT ACTGGCTGGT TTTTCAATGT GCTATTTAGT GTTAAGCTCC
CTGTTCAGTG CGTATCCGAG GCAGTTTAAT GTATTGGTGC CTGCGCTGCT GATCTGGATC
ACGTATATCC TTAAAAATAC CGTAAAAATA GATCTTAAAA TATCAGCCGG AAACTAA
 
Protein sequence
MFFNTISLFY MQIRSIKDYS PFALFLPLLV LYTAYVCYFH TDQMEGDEMR YIQFAKNLLQ 
GFYSPAYPHI DLINGPGYPI VLMPFAALST PLIFITLFNA VLYYVSVVFL FKAIQLVTLS
FKAACIAALC WGLNILAYQE MPCILTECLT AFLISAFSYQ LIRIYSTPGF TYKTLLPAGF
TFGFLILTKV IFAYVLVILL VCTGICYVLR KHSDLMLKIV CIFSFALLTI TPYIIYTYSL
TGKFFYLSSE GGKVLYWMTS LDAHEYGDWN NNTFTANCSE TFCNADLIAV NHAADIQQIN
ACKDVLEADA LFKHMAIEHI KTNPVKYIKN WFANIGRLLF GFPASYYFQS PATLVRIYIN
SVLLLALVYS CIAVLWNLKK IPVEIKILAG FSMCYLVLSS LFSAYPRQFN VLVPALLIWI
TYILKNTVKI DLKISAGN