| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1630 |
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| Symbol | ldhA |
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| ID | 4187007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1907629 |
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| End bp | 1908573 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638071623 |
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| Product | phosphoglycerate dehydrogenase |
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| Protein accession | YP_678240 |
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| Protein GI | 110638032 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00981663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00651667 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTTCAA TAAAATGTTT GATTGTTGAT GATGTTGATA CTGCCTTATT TCAATTGTTA
GATAAAGCAG CTATAGCGTA CGATTATAAG CCCGACTGGA GCAAAGAAAC ATGTATCGAA
GCGCTGCCGG CATATGAAGG ATTAGTGATC CGGAGTAAAT TCAGAGTAGA TAAAAAAATT
ATTGATTCGT GTACGAAGCT TCAATTCATA GCACGTGCAG GAGCAGGAGT TGATAATATT
GATAAAGAAT ACCTGAAAGA AAAAAACATT GCACTGTTCC ATGCTTCAGA AGGAAACAGA
GTAGCTGTAG GCGAGCATAC CCTTGGTTTA ATCTTAGCTC TTATCAATAA TATTGTACGG
TCTGATACGG AAGTTAAAGA TGCGATCTGG CTTAGAGAAG AAAACAGGGG ATATGAACTT
GAGTCATTAA CGGTAGGATT AATCGGGTAT GGAAATATGG GTAAAGAAAC ATCCAAACGC
CTGGCTGCCT TTGGCTGCAA AATAATTGCC TACGATAAAT ACCGTGAAAA TTATTCCTGC
AAAAATGCAG AACAGGTGGA TATTGAAAAA TTAAAAGCAG AAGCTGATAT TATAAGTTTA
CATATTCCGT TAGATGATTT TTCCCGCGGA TGGGTTGATA AAACATTTTT CGATTCTGTT
GCAAAACCTT TTTGGCTGAT AAATACAGCA CGCGGAGAAA TTGTAAAATT AAAAGACCTG
AATGAAGCCT TACAATCAGG TAAAGTACGC GGGGCTGCTC TTGATGTATT GGAAAATGAA
AAACTTTCAA CACTTACAAC AGAACAGCGT CAGGATTTTG ATTTGTTAGT AAAAAATCCA
AATGTTATCT TAACACCGCA TATAGCTGGC TGGACATTTG AATCTTACAG AAAAATAAGT
GAAGTATTGG GCGAAAAAAT ACTCTTTTGG TATTTAAATA AATAG
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| Protein sequence | MASIKCLIVD DVDTALFQLL DKAAIAYDYK PDWSKETCIE ALPAYEGLVI RSKFRVDKKI
IDSCTKLQFI ARAGAGVDNI DKEYLKEKNI ALFHASEGNR VAVGEHTLGL ILALINNIVR
SDTEVKDAIW LREENRGYEL ESLTVGLIGY GNMGKETSKR LAAFGCKIIA YDKYRENYSC
KNAEQVDIEK LKAEADIISL HIPLDDFSRG WVDKTFFDSV AKPFWLINTA RGEIVKLKDL
NEALQSGKVR GAALDVLENE KLSTLTTEQR QDFDLLVKNP NVILTPHIAG WTFESYRKIS
EVLGEKILFW YLNK
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