Gene CHU_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1608 
Symbol 
ID4187084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1886240 
End bp1887877 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content35% 
IMG OID638071601 
Producthypothetical protein 
Protein accessionYP_678218 
Protein GI110638011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.398397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.502093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TGTTTACGAG TTTATTATTG TTAACACAAT CTGTTGTGGG ATTCACACAG 
ATAACATCAA CATTTGAGAG CTTGCCGCTT GATCAGACAG GATACTGGAT AGGAGCAGAT
AAGTCTGGCG GTTTTACAGA TGGCAACGCT TATTTTAAAA ATAATTATTC CACAGAATAT
GGAGATGGTT ACTGGGAAGG TGGCTTTGCT TATTCTAATC ACACAGATGT AACAACAGCT
GGGTTTACAA ATCAATACAG TGTTTATACA GGCAGTGGTG TTGGCCATTC AGGTAAATTT
GCAATCGGAA AAGATCAGGC AATTGTGCAG TTAAAAAATG AAGCAAAAAA ATCTCCGGTA
ACAGGTTTTT ATGTAGCTAA TACTACTTAT GCTGTATTAG ATATGAAAAA TGGTACACCA
ACTATTTCTA AAAAATTTGG AGGCGCATCA GGAAATGACC CGGATTATTT TCAATTAGCA
ATTACTGGTT TCAGAAACAA TGCTGTTATT TCAGATACAG TAAAAATTAA ATTAGCCGAT
TATACTTTTA CTGATAATGC AAAAGATTAT ATTTTAGACA GATGGAAATG GGTAGATCTA
AGACCATTGG GTGTTGTAGA TAGCTTAATC TTTCTTTTAA CCTCATCTGA CAATGGTAAT
TTTGGAATGA ACACTCCAAA CTATTTTGCA ATAGATCATT TCAATGAACC GCTTTATGAT
GTAGCAGTTG CAGATGGCAG TACCCAGGCT TTATCTAAAG ATGATCTATT ATTTAAATCA
TGGGCAAATG CAGCTGCTGT AACAAGAGGT TATCAGGATA TTGCAGTAGG TGGGGCATTG
GCCAATGTAG GAACAGATGA TAAAGCAACG TTAAAAGCTG ACGGATCAGT CGTATCATTA
GGAGATAATG GCGTAGCAAT TCTTGAATTT CAATATCCGG TGATGAACGG TGCAGGCCCT
GATTTTGCTG TGTTTGAAAA TGGATTTAAC AACTTCAGCG GTCCGGGACA ATTTCTTGAA
TTAGCATTTG TTGAAGTAAG TTCAGATGGT ATAAATTATG TGCGTTTTCC TACCGTTTCA
AAAACAAATT CACTTACTCA GATTGGTAGT TTTGGATATA CAGATGCTGC ATTATTGCAC
AACCTGGCAG GGAAATATGT GTCAGGATAT GGTACACCAT TTGATCTGGA TGAATTAAAA
AATAATACGC TCATAGATGT AAACAATATT ACACATGTAA AAATTATTGA TGTAATCGGA
TCAGTTAATT CAGGCATTGC AACAAAAGAT TCATTAGGTA ACCCGGTAAA TGATCCATAC
CCAACAGCTT TTGGTTCTGG TGGATTTGAT CTGGATGCAG TAGGTGTAAT TAATCAGAAT
GCACTTTCAA CATCTGTAAA AAACACATCC GTGCAAATAA TTCAGGTATA TCCAAACCCA
TCTTCAAATA CATTTAATAT ATCTTTATTA AACCAATCGT ACGTTGGTGA ACAATTAACT
ATTTTTGATT CTAATGGTAT ACTAATGGCA GATCAGATTG TTTCAGGAAA AGACATCATT
GACGCATCTT CATGGAACAA TGGCATCTAC TATATCCGTG TAGGAAATAC AACGCAAAAA
ATTATTAAAA TAGACTGA
 
Protein sequence
MKKLFTSLLL LTQSVVGFTQ ITSTFESLPL DQTGYWIGAD KSGGFTDGNA YFKNNYSTEY 
GDGYWEGGFA YSNHTDVTTA GFTNQYSVYT GSGVGHSGKF AIGKDQAIVQ LKNEAKKSPV
TGFYVANTTY AVLDMKNGTP TISKKFGGAS GNDPDYFQLA ITGFRNNAVI SDTVKIKLAD
YTFTDNAKDY ILDRWKWVDL RPLGVVDSLI FLLTSSDNGN FGMNTPNYFA IDHFNEPLYD
VAVADGSTQA LSKDDLLFKS WANAAAVTRG YQDIAVGGAL ANVGTDDKAT LKADGSVVSL
GDNGVAILEF QYPVMNGAGP DFAVFENGFN NFSGPGQFLE LAFVEVSSDG INYVRFPTVS
KTNSLTQIGS FGYTDAALLH NLAGKYVSGY GTPFDLDELK NNTLIDVNNI THVKIIDVIG
SVNSGIATKD SLGNPVNDPY PTAFGSGGFD LDAVGVINQN ALSTSVKNTS VQIIQVYPNP
SSNTFNISLL NQSYVGEQLT IFDSNGILMA DQIVSGKDII DASSWNNGIY YIRVGNTTQK
IIKID