Gene CHU_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1555 
Symbol 
ID4185725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1812129 
End bp1812701 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content39% 
IMG OID638071549 
Producthypothetical protein 
Protein accessionYP_678166 
Protein GI110637959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.247042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTT TAGGAAATGC TGTTGTAAGC GACGATGTAG CTGAAAAGTT CTTTGTGTGC 
GATTTATTGA AATGCAAAGG GGCCTGTTGT GTAGAAGGAG ATATGGGAGC GCCGCTTGAT
GTGGAAGAAG CCCTTATATT AGAAGAAATT TATCCGATTG TTAAGCCGTA TTTATCAAAA
GATGGTGTTA AGACAATTGA AAAGCAGGGG ACATCTGTTA CCGATGAAGA AGGTGAGCCT
GTAACGCCAA CAATAGGCAA TAACAGAGAA TGCGCCTATG CGATATACGA TCCGAAAGGC
ATTTTAAAAT GCGGTATTGA GCAGGCATAT ATTGAAGGCA AAATTACGTA TCAGAAACCC
ATTTCCTGTC ATTTGTATCC GATCCGTATT ACCAAATACG ACGAGTTTGA TGCCTTGAAT
TACGACCGCT GGAGTATTTG TAAACCTGCA TGTTCAAACG GTAAGGAATT AGGCGTTCCT
ATTTATAAAT TTTTGAAAGG GCCGCTTATC CGTAAGTACG GTGAATCCTG GTATGCAGAA
CTTTGTAAAA CAATTGAAGA TAAACAAAAA TAA
 
Protein sequence
MISLGNAVVS DDVAEKFFVC DLLKCKGACC VEGDMGAPLD VEEALILEEI YPIVKPYLSK 
DGVKTIEKQG TSVTDEEGEP VTPTIGNNRE CAYAIYDPKG ILKCGIEQAY IEGKITYQKP
ISCHLYPIRI TKYDEFDALN YDRWSICKPA CSNGKELGVP IYKFLKGPLI RKYGESWYAE
LCKTIEDKQK