| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1531 |
|---|
| Symbol | efp |
|---|
| ID | 4184509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1786535 |
|---|
| End bp | 1787095 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638071525 |
|---|
| Product | translation elongation factor P (EF-P) |
|---|
| Protein accession | YP_678142 |
|---|
| Protein GI | 110637935 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00313257 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.194022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC CTAATGATCT TTCCAGAGGT TCATTCATTC GTTACAATGG AGAACTTCTT
ACAATTACTG AAATTGAACA CCGCACACCC GGTAATTTAA GAGCTTTCTA TCAGGCTAAA
ATGAAGAATG TTAAATCCGG CAAATCAGCT GAAGCCCGTT TCAGAGCAGA CGAAGATATT
GACATGGTTC GTGTTGAGGT AAAAGAGCTG CAGTACTTAT ATAAAGACGG CGACAGCCTT
GTTTGCATGG ATACTGAAAC GTTCGATCAG ATCTATATTC CAACGATCTT ATTCGGTGAT
GCAATTGATT TTGTAAAAGA AGAAATGAAT ATGCTGATTT CCTTTGATGG TGAAACGCCT
ATTCAAGGTG AACTACCTTC ACATGTAGAA ATGGAAGTAA CCTATACAGA GCCCGGTATT
AAAGGAGATA CAGCAACTAA AACATTAAAG CCTGCAACAG TTGATAACGG ACCTACGATT
ACAGTACCGT TATTTGTTGA GATCGGCGAC CGCATAAAAA TTGACACCCG CACGCGTGCC
TATGTGGAGC GTGTAAAATA A
|
|---|
| Protein sequence | MAKPNDLSRG SFIRYNGELL TITEIEHRTP GNLRAFYQAK MKNVKSGKSA EARFRADEDI
DMVRVEVKEL QYLYKDGDSL VCMDTETFDQ IYIPTILFGD AIDFVKEEMN MLISFDGETP
IQGELPSHVE MEVTYTEPGI KGDTATKTLK PATVDNGPTI TVPLFVEIGD RIKIDTRTRA
YVERVK
|
|---|
| |