Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1458 |
Symbol | |
ID | 4184014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1691722 |
End bp | 1692435 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638071451 |
Product | hypothetical protein |
Protein accession | YP_678069 |
Protein GI | 110637862 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0671711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0432371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTAAGA AGGCGAGTGA TTTCAGCTTA AAAGCTGCCC TTACTTCGTT ACCATTTGCA TTGTTTGCTA TGCCACGCAT TGTTCAGGCA AGTACACAGG CAAATACACA ATCGGTAACA GATACATTGA ATTATGCATT AACACTTGAA TATCTGGAAG AGGCTTTTTA TGTACAGGGG TTAGCTAAAT CAGGTTTGAT TGACAGTGCA GATATGACAA TTTTTAATCA GATCAAAAAA CATGAATCAG CGCATGTTGT TTTCCTGAAA AATGTATTAG GGAGTGCCGC TAATCCTTCT CCAGCATTTG ATTTTGGTAC CGCCTTTGAT AGCTATGCAA ATTTTCTTGC AACTGCGCAG GCATTGGAAG ATACAGGTGT TAGAGCATAT AAGGGTCAGG CAGGTAATCT TATAACAAAT AAAGTAGCCT TAACAGCAGC GTTACAGATC CATTCCGTAG AGGCACGTCA CGCATCAGAA GTGCGCAGGC TTAGAATGCT GAATGGCTGG ATCGGTGTGG GTGAAGCAGG CGCTACGTAT GGAGCCGGTG AGGATGCAAA TTTCCCTGCA GAAAGTAATC TAACCCAGGG TGGTGTTGAT CTGTCTATTT TGGCTTCAGC TGATGTTACG ATGACAAATA TCGCAGAAGC ATTTGATGAA CCATTGGATA AAAATACCGT GTTCGGTATT GCACAAGGGT TTATTGTAAG TTAA
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Protein sequence | MFKKASDFSL KAALTSLPFA LFAMPRIVQA STQANTQSVT DTLNYALTLE YLEEAFYVQG LAKSGLIDSA DMTIFNQIKK HESAHVVFLK NVLGSAANPS PAFDFGTAFD SYANFLATAQ ALEDTGVRAY KGQAGNLITN KVALTAALQI HSVEARHASE VRRLRMLNGW IGVGEAGATY GAGEDANFPA ESNLTQGGVD LSILASADVT MTNIAEAFDE PLDKNTVFGI AQGFIVS
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