| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1447 |
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| Symbol | gatB |
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| ID | 4184003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1677313 |
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| End bp | 1678770 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071440 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_678058 |
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| Protein GI | 110637851 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.016106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCAGT CAATTATAGA TAAATATCAA CCGGTTATTG GTTTGGAAGT TCATGCGCAG
TTATCTACGC TGAGTAAAAT ATTTGCTTCA GACTCAGCAG AGTTCGGCAG TATGCCCAAT
ACCAACGTAA GTGTTATTAC ACTTGGCCAC CCGGGCACAT TGCCCAAGCT GAATAAGCGT
GTGGTAGAGT ATGCCATAAA GATGGGCTTG GCATGTGGCT CAGAGATCAA CCGCTTAACA
TTTTTCGATC GCAAGAATTA TTTCTATCCC GATCTTCCGA AAGGGTTTCA AACAACGCAG
GACAGAGCAC CGATCTGTAT TGGCGGGAGC ATTAAAATTA AATTGAAGAA TACCGATCAG
CAGACAATCC GTTTGAATCG TATTCACATG GAAGACGATG CAGGTAAGAA CATGCACCTT
GCAGGTGAAG TAGATACACT CGTTGATTAC AACCGTGCCG GTGTTCCATT GATCGAGATC
GTTACAGAGC CCGATATCCG TACGTCGGAA GAAGCCTACG CGGTAATGTC CGAGATCCGT
AAGCTGGTTC GTTATCTGGA GATCTGCGAC GGTAACATGG AAGAAGGTTC TATGCGTTGT
GATGCCAACG TTTCTGTAAT GCTTAAAGGT GCAAAAGAAT ACGGTAAAAA AGTAGAAGTT
AAAAACATGA ACTCTGTACG TAACGTGCAG CGTGCAATTG ATTTTGAAAT TTTACGTCAG
ATTGAATTGA TCGAAAAAGG AGAACAGATT GTTTCTGAAT CCCGTCAGTT TGATGCGGAA
GACGGTACCA CACATGGTAT GCGTACGAAG GAAGAACTTA ACGATTACCG TTATTTCCCT
GAGCCGGATC TGCAGCCTGT GGCTGTAAGT GATGCCTGGC TGGCTGAGAT CAAAGCTGCC
TTGCCGGCTT TACCGCAGGA GTTGTATGCA AAATTCTCAA ACGAATTTAA ATTATCTGAA
TACGATGTAA ATGTATTGAC AGATAGCAAA GAAATTGCCT TGTATTTCAA CGAAGTATGT
AATCATACTA AAAATTATAA AGCAGCATCC AACTGGGTAA CCGGTGCGGT GAAATCACAT
TTGAATGAAT TGGCGCTGCA TATAAAAGAC CTGAAGGTAT ATCCTGAACA GATTGCTCTT
TTGGTTGATC TGATTGATTC CGGGAAAGTA AACACAACGA TTGCTAGCCA ATCAATCTTC
CCGGAACTGC TTAAAGGTAC AAGTAAATCT CCGCAGCAGA TTGCCGAAGA AATGAACCTG
ATTCAACAAA GCAATACAGA TGAATTGATT CCCTTGATAC AGGAAATTAT TGCGAAGTAT
CCGGCCAAAG TTGCCGAATA CAAAGGTGGT AAAACGGGTA TTCTGTCTAT GTTTATGGGT
GACCTGATGA AAGCTACCAA AGGCAAAGCA GATCCGAAAG TTGCTACAGA ATTGATTAAA
CAAGTGTTGG AAGCATAA
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| Protein sequence | MDQSIIDKYQ PVIGLEVHAQ LSTLSKIFAS DSAEFGSMPN TNVSVITLGH PGTLPKLNKR
VVEYAIKMGL ACGSEINRLT FFDRKNYFYP DLPKGFQTTQ DRAPICIGGS IKIKLKNTDQ
QTIRLNRIHM EDDAGKNMHL AGEVDTLVDY NRAGVPLIEI VTEPDIRTSE EAYAVMSEIR
KLVRYLEICD GNMEEGSMRC DANVSVMLKG AKEYGKKVEV KNMNSVRNVQ RAIDFEILRQ
IELIEKGEQI VSESRQFDAE DGTTHGMRTK EELNDYRYFP EPDLQPVAVS DAWLAEIKAA
LPALPQELYA KFSNEFKLSE YDVNVLTDSK EIALYFNEVC NHTKNYKAAS NWVTGAVKSH
LNELALHIKD LKVYPEQIAL LVDLIDSGKV NTTIASQSIF PELLKGTSKS PQQIAEEMNL
IQQSNTDELI PLIQEIIAKY PAKVAEYKGG KTGILSMFMG DLMKATKGKA DPKVATELIK
QVLEA
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